Notothenia coriiceps (black rockcod): 104955866
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Entry
104955866 CDS
T04920
Symbol
mgat5b
Name
(RefSeq) alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
KO
K09661
mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [EC:2.4.1.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00510
N-Glycan biosynthesis
ncc00515
Mannose type O-glycan biosynthesis
ncc01100
Metabolic pathways
Module
ncc_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
104955866 (mgat5b)
00515 Mannose type O-glycan biosynthesis
104955866 (mgat5b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104955866 (mgat5b)
Glycosyltransferases [BR:
ncc01003
]
Glycan extension
Wide specificity
104955866 (mgat5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_18
SKA2
Motif
Other DBs
NCBI-GeneID:
104955866
NCBI-ProteinID:
XP_010781558
UniProt:
A0A6I9P3G9
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MIASSSDLSIMVRRCLLTFKPFRIFVVGIGFFSLCFLMTSLGGQLSAKRPGDSPFTVRSE
VLGGQESRGVLRKISDMLEVIMKRMDALSKVGNSTDAHRLDELSSALDRIQPVGLVERIQ
AIAQNMSDMAGRVEQILQRSMAGNKVRDGTLAQCGTPKDPRYPDCLSKMDWMHARWTSDP
CYAFYGVDGSDCSFLVYLSEVEWFCPPLIWRNQTATPTLKPLPKKQAVFQSDIGALLEQV
GTGKESLSFMKRRMRRMAAQWASAARRLDDRLRSHWREQNRTLNQSMRFLGVPPGRGSCP
LTGPLPFDLIYTDYHGLQQMKQHMGLSLRKHKCHIRVIDTFGTEPAYNHEEYAILHGYRT
NWGYWNLHGQQYMTMFPHTPDNSFMGFVAEELNETEKQNIQRNKVNNMAVVYGKEASMWK
GKEKFLTILHRYMEIHGTVYYETQRPPEVPAFVKNHGLLPQQELQQLLRKAKLFIGLGFP
YEGPAPLEAIANGCIFLQPKFNPPHSSLNHDFFRGKPTSRKVSSQHPYAEQYIGRPHVIT
IDFNNSEEFEATIREIMRINVEPLLPYEYTCEGMLERVHAYIQNQDFCSPEAPFPPVNSS
WLSSPFVLLPNSSILTWASNASSYTSWPPLSALRLLASLEGESCVEACQGAELICEPALY
RFINIKEAFSALELQCDGVESQVNHLLPAFSAEHAECGLQQDPLLFSCAGSSAKYQRLCP
CRDYRVGQVALCRDCL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattgcatccagcagcgacctgtccattatggtgaggagatgtcttctcactttcaaa
ccattcaggatctttgtggtggggattggcttcttcagcctgtgctttctaatgacctct
ctcgggggccagctctcggccaagagacccggagactctcccttcacggtgcggagcgaa
gtgctcggtgggcaagagtctcgcggtgtgctgaggaagatcagtgacatgttggaggtc
attatgaagaggatggatgctctgtctaaagtgggcaactccacagacgcccaccggctg
gatgagctcagctcggccctggacaggattcagcctgtagggctcgtggagcggatccag
gctatagcccagaacatgtccgacatggcagggagagtggagcagatcctacagcgcagc
atggccggcaacaaagtcagggatggaacattagcacaatgcgggactcctaaagacccc
cgttatccagactgtctcagcaagatggattggatgcacgctcgttggacgtcggaccct
tgctatgccttttatggtgtagacggctcagattgctccttcctcgtctacctgagcgag
gtggagtggttctgccctccactaatctggaggaaccagactgctacacccaccttgaag
cctctgcccaaaaaacaggctgttttccagtctgacatcggggctctgctggagcaggtg
ggcacggggaaggagtccctgagcttcatgaagaggcgcatgcgcaggatggcagcgcag
tgggcctccgctgctcgacggctggatgacaggctgcgcagccactggagggagcagaac
aggactctcaaccaatcaatgaggtttttgggcgtccctcctggaagaggaagctgccct
ctcacgggacctctgccctttgacctcatctacaccgactaccacggcttgcagcagatg
aagcagcacatgggtctgtcgctgaggaagcacaagtgccacatccgtgtgattgacacc
ttcggcacggagcctgcttataaccacgaggagtacgccatcctgcacggctaccggaca
aactggggctactggaacctccacggccagcagtacatgaccatgttcccccacactcct
gataactctttcatgggttttgtggcggaggagctgaatgagacggagaagcagaacatt
cagcggaacaaggttaacaatatggctgttgtgtacggcaaggaagccagcatgtggaag
ggaaaggaaaagttcctgaccattctgcaccgctacatggagatccatgggacggtgtat
tatgagacgcagcgtcccccagaggtgcccgccttcgtcaagaaccacggcctgctgccc
cagcaggagctgcagcagctgctcaggaaggccaagctgttcattgggttaggattcccc
tacgaaggtcccgcccctttggaggccatagccaatggctgcatcttcctacaacccaag
tttaacccccctcacagctctctcaatcacgacttcttcagagggaagcccacctccagg
aaggtgtcctctcagcatccgtatgcagagcagtatattggcaggccgcatgtcatcact
atcgacttcaataactctgaggagtttgaggccaccatccgtgagatcatgaggatcaat
gtggagccactcctgccgtatgagtacacctgtgaggggatgctggaaagagtgcacgcc
tacattcagaaccaggacttttgttcccccgaagctccctttcctcctgtaaactcgtct
tggctgagcagtcctttcgtcctgctgcctaactccagcatcctaacctgggcctccaac
gccagctcctacacatcctggccgcccctcagtgcgctgcgcctgctggcttctctggaa
ggagagtcctgtgtggaggcgtgccagggcgcagagctcatctgtgaacctgccttgtat
cgcttcattaacattaaggaggccttcagcgcgctggagctccagtgtgatggagtggag
tcccaggtgaaccacctcctccctgccttctcagcggagcatgctgaatgtggcctgcag
caggatccgctgctgtttagctgcgccggctccagcgccaaataccagcgcctctgcccc
tgcagggactatcgggtcggccaggtggctctgtgcagagactgcctatga
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