Notothenia coriiceps (black rockcod): 104956004 Help Entry 104956004         CDS       T04920                                  Name (RefSeq) cadherin-23-like   KO K06813   cadherin 23 Organism ncc  Notothenia coriiceps (black rockcod) Brite KEGG Orthology (KO) [BR:ncc00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ncc03037]     104956004    04515 Cell adhesion molecules [BR:ncc04515]     104956004 Cilium and associated proteins [BR:ncc03037]  Primary cilia and associated proteins   USH complex and associated proteins    104956004 Cell adhesion molecules [BR:ncc04515]  Cadherins   Major cadherins    104956004 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Fibulin_C Sde0182_C Motif Other DBs NCBI-GeneID:  104956004 NCBI-ProteinID:  XP_010781730 UniProt:  A0A6I9P2P9 LinkDB All DBs Position Unknown AA seq 1666 aa AA seqDB search MNGNSNSLFSIDRQSGLLTRGRRALDRETSSSHVLEVEAYNSDEGSMRSFVRVIIYVDDA NDEAPVFTQQQYNRLGLRETAGVGTSVIVVRATDPDTGDGGAVAYALVTGSDRKFEVDVS TGLVTTVDYLDYETKTTYLMNVSVTDQAPPFHKGFCTVYVTLLNELDEAVAFLSAGYEVS LGENIATGTQVTQVQAQSADNLNQLTYRFDPDTSPSALALFKIDSVTGRITVTGLLDREK GDMYTLTVVADDGGPKKDSTVKVSITILDENDNSPEFDITSDTSVDIRENTALGKKVAVV LGRDRDAGLNGLVNFTLVAGNMEDVFKIKTVNNTYGEVFVNAPLDRESVDRYLLKVRAID GGSPPRYSDHSLTINILDINDNAPVIESLKGYNVSISENVGGGTSVLRVIATDQDIGPNA MLFYYITAGNQDLTFRMDRVTGEMVTRPAPPDRERQQEYRLTVTVEDDGTPPLSISTTIY VHIVDENDNAPEFPEEEYVTVLSEGPETVGATIATVTAIDPDEGLNGTLRYAIAQGNLIQ TFNINSITGRITAVKELDYEISKGHYALVVTATDQCENPALRLTSSTTVLVSVLDVNDVT PTFPRAFEGPFEVTEGQPGPRVWTLKASDEDSGLNGKVEYSITGGDPQNEFMVSPVEGEL RVRKDVELDRETTAFYNITVTARDLGTPSRNTSVVVGVNVRDINDNDPVLLNLPYNTSVR EGATIHTAVARVQARDADSGRNALLTYNITAGNPDGAFYVNDTTGVVQVNRPLDRERVSE YRLTITVKDNPENPRIARRDSDLLVISILDENDNRPVFTRTSYRAEIIENSAAGSKVSVL NGPVLAEDKDIGPNAVVKYRLLGARVDLFTVDANSGMIRVRQGAQLDREAFQEPRVELFL VGEDIGGLNSSVPLTVTILDQNDNPPIFSPASFSVRLPENSPTGVVVTQLSATDADSGSN GWLTYRLESGAQDRFMVDSLSGTVLVGNTTLDREERGSYRLVVMATDRGTPSMSGTATLT VILDDVNDSRPRFIEPITMINVNESTPPGVVVATLTAEDPDLHPRLEYYIISVEAKDDGN NAVDGLQESFGIDLHTGAVFVRNPINRELVATFEIIVSVHDNASEVIDKSGSVPNARLTI NVLDVNDNAPRFRPFGVTNFTEQILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLHLPRG GYVRLEDPSTGKIVANQTVDFEQIQWLNFTIRARDHGTPPRIAELPVYLRIVDVNDNNPV FLQPSYQEPVFENVNLGTTIVRVSATDADSGLFAVIEYSLVDGEGKFAIKSLTGEIYILS PLDRETKDHYTLTAVARDNPGGTSNNRRENSVQVLVTVVDINDYRPRFSERMYNTSVFEN EPSGTSVITVRATDLDEGENGAVLYSLLGAHSDAFSLDPNAGLIRSRRLLQSSERFNLTV VATDQGRPPLWGTADLFIVVIDVNDNRPVFVRPANGTIIHISEEQPPGLPVYEVHATDSD EGLNGEVRYGFLQTGAGNRDWENFHIDATSGVITTTVKLDREKQALHSFIIVARDMGQPV PYETTQPLQVALLDVDDNEPVFLKPPRGSLPYQKLTVLEHSRPGTVVGNITRAVDADEGT NAIVYYFIAASGQYHMESDTGSVLEALTGTDGRMRLMRLKNLRGTN NT seq 5001 nt NT seq  +upstreamnt  +downstreamnt atgaatggcaacagcaacagtctgttcagcattgacaggcagagcgggctgctgaccaga ggccgcagggcgctggacagagagaccagtagctcccatgtgttggaggtggaggcctac aacagtgacgagggcagcatgaggagcttcgtcagggtgatcatttatgttgacgatgcc aatgatgaggcccccgtgtttacccagcaacaatacaaccgtctgggcctgagggagacg gctggtgtcggcacctctgtgattgtggtgcgcgccacagacccagacactggtgatggt ggagccgttgcttacgcccttgtgaccggctcagaccgcaagtttgaggtggatgtgagc actggcctggtaaccactgtggactacctggactacgagaccaagaccacctatctgatg aacgtctctgtcactgaccaagccccccctttccacaaaggcttctgcaccgtctacgtc acgctgctcaatgagctggatgaggccgtggccttcttatccgccgggtacgaggtttcg cttggtgagaacatcgccacggggacccaggtgacccaggtgcaggcccagtcagctgac aacctgaaccagttgacttaccgcttcgaccctgacacgtcgccttccgctctggccctc ttcaagatagacagcgtcacgggccgtatcacagtgaccggcctcctggacagagagaaa ggcgatatgtacaccttgactgttgtcgctgatgatggaggacccaaaaaggactccact gtgaaggtttcgatcacaatcctggatgagaatgacaacagtccagagtttgacatcaca tccgatacttcagtggacatccgagagaacacagccttggggaaaaaagtggcagtcgtg ctgggaagggacagagatgctggattaaacggactggtcaatttcactctggtggcaggc aacatggaggacgtgttcaagatcaagactgtgaacaacacctatggggaggtttttgtg aacgctcctctggacagggagtcagtagaccgctacctgctgaaggttcgtgccattgac ggtggctcacctcctagatactctgaccactccctcaccatcaacatcctggacatcaat gacaacgcacctgtcatagaaagcttgaagggctacaacgtcagcatcagtgaaaatgtt ggcggaggtacatcagtgctccgtgtgatagctacagaccaagacatcgggcccaacgcc atgctgttctattacatcactgctggaaaccaggacctgaccttccgcatggaccgcgtc accggagagatggtgacacggccggccccccccgaccgagagcgccagcaagagtaccga cttactgtcactgtggaagacgacggcacgccacctctgtcgatctccaccaccatctat gttcacatcgtggatgagaacgataacgctccagagtttccggaggaggagtacgtcacg gtgttaagtgagggtccggaaacagtgggtgccaccatcgccacggtaacagccatcgac ccagacgagggtctgaacggcaccttgagatatgctatcgctcagggaaacctgatccag acctttaatataaacagcatcacggggaggattacagccgtaaaggagctggactacgag atcagcaaaggacactacgcgctggttgttacagcaaccgaccagtgtgaaaatcctgct cttcgcctgacctcaagcacaacagtgctggtaagtgtcctcgatgtgaacgatgtaaca ccaactttccccagagcctttgagggacccttcgaggtgactgagggacagccgggtcct cgggtctggactcttaaagccagcgatgaagactctgggctcaacgggaaagtggagtac agcatcaccggtggcgatccccagaatgagttcatggtttctccagtcgagggggagctt cgggtgaggaaggatgtagagctggaccgagagacaacagccttctataacatcaccgtc acagcacgagacctgggcaccccgtctcgcaacacctcggtggtggtgggggtcaatgtc cgagacatcaatgacaacgacccagtcctcttgaacctgccttacaacaccagtgtgagg gaaggagccaccatacacaccgctgtggcccgggtccaagcccgagatgcagacagcgga cgcaatgctctgctcacttacaacatcaccgcgggcaaccctgatggagccttctacgtc aatgacacgacaggtgtggtgcaggtgaacagacccctggacagagagcgggtgtcagag tacagactcactatcaccgtcaaagacaaccccgagaacccccgcatcgctcgcagggat tcagacctcttggtgatcagcattctggatgagaatgacaacaggcccgtgttcaccagg accagctacagggctgagatcatagagaactcggcagcaggcagtaaagtatcagtgtta aatgggccagtcctggcagaggataaagacatcggacccaacgctgtagtgaagtaccgc ctgctgggagccagggtggacctcttcactgtggatgccaattctggtatgatccgggtg cgtcagggggctcagttggaccgcgaggcgtttcaggagcctcgtgttgagctgtttctg gttggggaggacataggtggtttaaacagcagcgtccctctcacagtcaccatcctggac cagaatgacaacccccccatcttcagcccggccagcttcagcgtccgactccctgagaac agccccactggtgtggtggtgactcagctgtctgccactgatgctgactcgggctccaat ggctggctgacgtatcgtctggagagcggtgctcaggaccgcttcatggtcgattcgctc tctggcaccgtcctggtcggcaacaccaccctcgatagagaagaacgcgggtcctaccgc ctggttgtcatggcaaccgatcggggcactccctcaatgtccggcacagccacgctgacg gtcatcctggacgatgtgaacgactcccggccccgtttcatagagcccatcaccatgata aacgtcaacgagtccacaccgccaggcgtggtggtggccacgctgaccgctgaagaccct gatctgcacccccgactggagtattacatcatctcagtggaggcaaaggatgatgggaac aatgcagtggatggcctgcaggagtccttcggcattgatttacacactggtgcagtgttc gtacgcaacccaatcaacagagagctggtcgcgacattcgagatcattgtgtcggtccac gacaatgccagcgaggttattgacaaatcaggaagtgttcctaatgcgagactcaccatc aatgtgttggatgtaaatgacaacgcccctcgtttccggcccttcggagtgaccaacttc acagagcagattttggaaggagctcagccaggtactacactgctctcagtgtcagctgta gaccccgataaaggtcccaacggccaggtcatctaccagctgctccacctgccccggggg gggtacgtcagactggaggacccctctactggtaagattgtagcaaaccagacggtggat tttgagcagattcagtggctgaatttcacgattcgggcccgagaccacggcactcctccg agaatcgctgagctgccagtttatctgcgcatagtggatgtgaatgacaacaaccccgtc ttcctacaaccatcctaccaggagcccgtgtttgagaacgtcaacctgggcaccaccata gtgcgtgtgagcgctacagacgctgactcgggcctctttgccgtcattgagtacagcctg gtagacggggaaggcaagtttgccatcaaatcattaactggagagatctacatcctttcc cctctggacagagagacaaaggatcattacactttaaccgctgttgcccgtgacaacccc ggcggcacctccaacaacagacgagagaactctgtccaggtcctggtgacagttgtggat atcaacgattatcgtccacgcttttcggagcgaatgtacaacaccagcgtgtttgagaac gagcccagtggaacgtctgtgatcacagtcagggcgacggacctggatgagggagagaat ggagcggtgctctacagcctgctgggcgcccactcagacgcgttctccctggatccaaac gcggggctgatccgctctcgccgcctgctccagtcttctgagcgtttcaacctgacggtg gtggctacagatcaggggcgcccccccctgtggggcactgcagacctgttcattgtggtc atagatgtcaacgacaacaggccagtgtttgtccggcccgccaacggaaccatcattcat atctcggaggagcagcccccaggcctgccggtgtacgaggtgcacgcaaccgactctgac gagggtctcaacggagaggtccgctacggcttcctgcagactggagccgggaacagagac tgggagaacttccacatcgatgccacgtctggagtcatcaccactactgtgaaactggac cgagagaaacaggccctccacagctttatcattgtggcccgggacatgggccagcctgtg ccttacgagaccactcagcctctgcaggtggcgctgttggacgtcgatgacaatgagccc gtcttccttaaaccgccgcgtggcagcttgccttaccagaagctgaccgtgctggagcat tcccgcccaggaactgtggtggggaacatcaccagagctgtggacgcagatgagggcacc aacgccatcgtctactactttattgcagcatcaggacaatatcatatggagtcagacact ggaagtgtgctggaggcgttgactgggactgatggaaggatgaggctgatgagactgaag aatctgcgaggaacgaactag

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