Notothenia coriiceps (black rockcod): 104956096
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Entry
104956096 CDS
T04920
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04137
Mitophagy - animal
ncc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104956096 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104956096 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104956096 (vcp)
03009 Ribosome biogenesis [BR:
ncc03009
]
104956096 (vcp)
04131 Membrane trafficking [BR:
ncc04131
]
104956096 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncc04147
]
104956096 (vcp)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104956096 (vcp)
Ribosome biogenesis [BR:
ncc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104956096 (vcp)
Membrane trafficking [BR:
ncc04131
]
SNARE
SNARE associated proteins
Others
104956096 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104956096 (vcp)
Exosome [BR:
ncc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104956096 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
CDC48_2
AAA_2
AAA_33
AAA_22
TIP49
AAA_14
RNA_helicase
AAA_28
Parvo_NS1
AAA_18
ATPase_2
nSTAND3
ATPase
Mg_chelatase
DUF815
IstB_IS21
AAA_7
AAA_17
Bac_DnaA
NACHT
ABC_tran
AAA_24
ResIII
TsaE
Sigma54_activat
PhoH
NB-ARC
SLFN-g3_helicase
Viral_helicase1
Zeta_toxin
KAP_NTPase
Cytidylate_kin
Rad17
AAA_6
UFD1
Motif
Other DBs
NCBI-GeneID:
104956096
NCBI-ProteinID:
XP_010781840
UniProt:
A0A6I9P308
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MPSSGGADPKGEDFSTAILKQRHRPNRLIVDEVLTDLTKAHNEDGSIVSLSQDKMEELQL
FRGDTVVLKGRKRRQTVCIVLTDNTCGQERVRMNRVTRNNLRVRLGDVISIHACPDIKYG
KRIHVLPIDDTIEGLSGNLFDVFLKPYFLESYRPVHQGDIFLVRGSMRGVEFKVVETDPS
PHCIVAPDTVIYCEGDPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFK
AIGVKPPRGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE
EAEKNAPAIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPN
SIDPALRRFGRFDREIDIGIPDSTGRLEILQIHTKNMKLGDDIDMERIAKETHGHVGADM
AALCSEAALQAIRKKLTLIDLEDDTIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEV
PQVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAI
AHECQANFISIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAG
DGSGAADRVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKA
SRTAILNANLRKSPIAKDVNLDFLSGITEGFSGADLTEICQRACKMAIREAIEAEIKAER
ERQNRPGVPMVRLSDWRLQLHA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcaggaggagcagatccaaaaggagaagatttctccactgccatcctgaag
cagagacacagacccaacagactcattgtggacgaagtgctcactgatctcaccaaagct
cacaatgaagacggcagcatcgtcagcctgtcacaggataagatggaggagctgcagctg
ttccgcggggacacggtggtgttgaaagggaggaagcgtcgccaaacggtgtgcatcgtc
ctgactgataacacctgtgggcaagagcgagtccgcatgaaccgtgtgacgcgcaacaac
ctgcgtgtccggctcggtgatgtcatcagtattcatgcctgccctgatatcaagtatggg
aaacggatccatgtcctcccaatagatgacaccattgagggcctgtctggaaacctcttt
gacgttttcctcaaaccgtacttcctggagtcttaccggcccgtccatcaaggggacatc
ttcttggtgagggggagcatgaggggggtggagttcaaggtggtggagactgaccccagc
cctcactgcatcgtagccccggacactgtcatctactgcgagggagacccaatcaaaagg
gaggacgaggaagagagccttaacgacatcggctacgacgacattggaggctgtcggaag
cagctggcgcagatcaaagagatggtggagcttcctctcagacacccgggcctcttcaag
gctataggagtgaagccccccagagggatcctgctgtacggccctgcaggcacagggaag
accctggtggcccgggctgtggccaacgaaactggggcctttttcttcctcatcaatggt
ccggaaatcatgagtaagctggcaggagagtcagagagcaacctaaggaaggcgtttgag
gaggcggagaagaacgctccggccatcatctttattgatgagctggactccatcgctcct
aagagagagaagacccatggtgaagtggagaggcgtatagtctcgcagctcctgaccctg
atggatggcctgaagcaaagagctcatgtagtcgtcatggcagccacaaaccgaccaaac
agcattgaccctgctctgagacgctttggcaggtttgaccgggagattgacattggaatc
cctgattccaccggcagactggagatcttgcagattcacaccaaaaacatgaagctcggg
gacgacattgacatggagaggattgccaaagagacccacggtcatgtaggcgctgacatg
gctgctctgtgctctgaagctgctctgcaagctatccgcaagaagctgaccctcatcgac
ctggaggatgataccatcgatgcagacctgctcaactcactggctgtcaccatggacgac
ttccagtgggcgctgagtcagagcaacccctcggctctgagagagactgttgcagaggtg
cctcaggtgaactgggaggacattggaggactggacgaggtcaagagagaactgcaagag
cttgtccagtaccctgtggagtatccagacaagttcctgaaatttggtatgactccgtct
cgcggagtgttgttctacggccctccaggctgcgggaaaactctgctggctaaggccatc
gcccacgagtgccaagctaatttcatctccatcaaaggacccgaaatgctcaccatgtgg
tttggagaatctgaggccaatgtcagagacgtgtttgataaggccagacaggcagccccc
tgcatcttgttttttgatgagttggactctattgccaaatccagaggagggggagcaggg
gatggaagcggtgcagctgacagagtcatcaaccagatactcacagagatggacggcatg
tcggacaagaagaatgttttcattattggagccacgaacaggccagacatcattgacagt
gccatcctgcggccgggtcgtttggaccagctcatctacatcccgctgccggacaaagcg
tctcgcacagcaatcctgaacgccaaccttcgcaagtctcctattgcaaaagatgtgaac
ctggacttcctttctggcatcactgagggtttctctggagcagacctgacagagatctgc
cagcgggcctgtaagatggccatccgtgaggccatcgaggccgagatcaaggctgagcgc
gagaggcagaaccgacccggcgtccccatggtcagactgtcagactggcggctacagctg
catgcttga
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integrated database retrieval system
