Notothenia coriiceps (black rockcod): 104956201
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Entry
104956201 CDS
T04920
Name
(RefSeq) alsin-like
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104956201
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
104956201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
MORN
PH_alsin
PH
HA_Alsin
DH_ALS2
VPS9
RCC1
SOS1_NGEF_PH
WD40_RLD
RhoGEF
RHG20_PH
PH_16
Motif
Other DBs
NCBI-GeneID:
104956201
NCBI-ProteinID:
XP_010781968
UniProt:
A0A6I9P4U9
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MCGQLGHVNSPVTVPQQIKLSDGLRVWDLSAGQSHSLLLADGDCVQPVLLYCGQQQEQTS
AQSEKSQQGQRSCQRSPNRAESYTVRPSLLPFCMEMGYISSVCSGGQRCAVLADQNVMGF
ISAIHELASIERHFYCWLSSAKKLLLTPLRNKESVCPSLGEPCTHLFFSLCESFVRLSIL
IGRHSTSLSYFLLEVQSSDVTALPLLTHTEHFMDIYKEYCSSVGNFEVMGGFRSLQKLSL
ECLGSQQTVLAQLCADQSIGGDVDLVSVFYRPLQQLHQYSRVMLKLTACFDVLTAEYQFL
HQGCNQFDSLSLSLLRKKKEAETTFLFWKSHSGKTTEVLRLPQRRVVCESSNRSLTLQNA
GRFSNHWFILFNDTLVHTQGAIPSQSLFSTHHIYPLSCLWVKPVTEDSSGHYAIKITCPE
ESFTLVASTPQEKNKWLRSLNQAVDQVLGGAGQGSSPGLTAMARTAPYTFTGEGCFKDAQ
YTGAWLAGRLHGRGTMKWPDGRTYRGNFKKGQEEGYGECLIPNKVLNKPDSYQGQWRDGK
IHGFGKYKYACGEVYEGCFCDGQRHGYGMLSSGKLAKNSSSVFIGQWVHDGKSGYGVYDD
MTRGEKYMGLWLDEQRHGNAVVVTQCGVYYEGTFKDNKMCGPGLLVSDDDTALHGEFSDD
WIVNGKGVLSLANGDCLEGQFTGEWTSGLKVVGTYTKPPPEEPENKERSSLHKVGQYLVP
ATQRWLCVFNECWSRLGCEAPGRGERAAAWDNIAVTITTARRQSIDLTRSQSKVLECLEF
IPHHGDPVTTANYDNIRRYLSKACETPHHPLGWLVETLVTVYRMTYVGVGSNRRLLRQAV
QELLAFLTHFYSIVRFLFPGLPEDGGIIPDPPASASEGEHNSNVAEQVVMVVSCSSLLLP
QLLPRLYPPLFTLYCLQEEQEEALYWERVLRLNKQPDQSLLSFLGVQEKFWPVWMSILGD
KKQIVSSSKDACFVSAVETLQLISTTFTPSDKLLIIQRTFEEMTQEGKPMLDGNFLWCMD
DLLPLFLYVVLRA
NT seq
3101 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggacagctcggtcacgtcaacagtcctgtcactgtacctcaacagataaagctg
tctgatggtcttcgggtttgggacttgtccgcggggcagagccactccctcctcctggct
gatggagactgtgtgcagccggtcctgttgtactgcggccagcagcaagagcaaacgtca
gcccagagtgagaagtcacagcagggtcaaaggtcatgccagaggtcaccaaacagagct
gagagttacacagtcagacccagcctgctgcccttctgcatggagatgggttacatcagc
agcgtgtgcagcgggggtcagcgctgtgcggtgctggcagaccagaacgtcatgggattc
atatcggccatccatgagctggcctccatagagagacacttctactgctggctgagcagc
gctaagaagctcctcctcactccgctgcggaataaagagagtgtgtgtccttcgttaggt
gagccatgcacgcacctcttcttctctctctgtgagagttttgttcgtctgagcatcctg
attggccgacactccacgtcactaagctacttcctgcttgaagtgcagagctctgacgtc
actgcccttcccctgctgacgcacactgagcactttatggacatttataaagagtattgt
tcttcagtgggtaactttgaggtgatgggtggattccgatcactccaaaaactctcactt
gagtgtttgggctctcagcagacggtgctggctcagctgtgtgcagaccagtccatcggt
ggtgacgttgatttggtttctgtgttttaccggccgctgcagcagctgcaccagtacagc
cgagtcatgctcaaactgacagcctgtttcgatgtgttaactgcagagtatcagttcctc
catcagggctgcaaccagtttgactccctgtccttgtccctgttgaggaagaaaaaggag
gctgaaaccaccttcctcttctggaagagccactctggaaaaactacagaggtcctgcgc
ctccctcagcgccgcgtggtgtgtgagagcagcaacagatctctgactctgcagaacgcc
gggcggttctccaaccactggttcattctgttcaacgacacactggtgcacacacagggt
gccattccctctcagagcctcttctccacgcatcacatctaccctctgagctgtctgtgg
gtgaaaccagttactgaagacagcagtggacattatgccatcaagattacatgcccggag
gagagtttcaccctggtcgcttcaaccccacaagagaagaataagtggctacggtctctt
aaccaggcggtggatcaggtgctggggggtgcaggtcaggggtcgtctcccgggctgaca
gcgatggcccgcacggccccctacacgttcactggagagggatgctttaaagacgcccag
tacaccggggcctggctggcagggcgacttcatggcagaggcaccatgaagtggccagat
ggacgcacctacagagggaactttaagaaaggacaggaggaaggctatggagagtgttta
atacctaacaaagtactgaataagccagacagctaccaaggacagtggagagatggcaag
atccatggcttcggcaagtacaagtatgcgtgtggcgaggtgtacgagggctgtttctgt
gacggacagcgccacggttacggcatgctgagctccggtaaactggccaagaactcctcc
agcgttttcattggccagtgggtccatgacgggaagtcaggatacggagtctacgacgac
atgaccagaggtgagaaatacatgggactgtggctggacgagcagcgccatggcaacgct
gtggttgtcactcagtgcggtgtgtactatgaagggaccttcaaagacaacaagatgtgt
ggtccaggtctgttggtgtcagatgacgacacagctttacatggggagttttctgatgac
tggattgtcaatgggaagggtgttttatccctggctaacggggactgtctggagggccag
ttcactggagagtggacctccgggctgaaggtggtgggaacgtacaccaaacccccccca
gaagaaccagaaaacaaagagaggagcagcctgcacaaagtgggtcagtacctggttcct
gcaactcagaggtggctgtgtgtattcaatgagtgctggagtcggctgggctgtgaggct
ccggggagaggagagagggccgcagcctgggacaacatcgccgttaccataacaaccgca
cgacgacagagcatagatctcactaggtctcagagtaaagtgttggagtgtttggagttc
attccccaccacggagacccagtgaccaccgctaactacgacaacatacgacgatacctc
agcaaggcgtgtgagaccccccaccaccctctgggctggctggtggagaccctggtgacg
gtctacaggatgacgtacgtgggggtggggtcaaaccgacggctgctccggcaggcggtg
caggagctgctggccttcctcacacacttctacagcatcgtcagatttctgtttccgggg
ttaccagaagatggcggcatcatcccagaccctcctgcctctgcctctgaaggcgaacac
aactctaacgtagcagagcaagttgttatggtggtgagctgttcctcgctgctcctcccc
cagctgctcccccgtctctacccccccctcttcaccctgtactgcctgcaggaggagcag
gaggaggctctgtactgggagcgcgtcctccgactcaacaagcagcccgaccaatcactg
ctcagcttcctgggagtgcaggagaagttctggccagtgtggatgtcaatccttggagat
aaaaagcagattgtatccagcagtaaagatgcctgttttgtttctgctgttgagactctc
caactaatcagcaccaccttcactccgtcagacaaactcctcatcatccagaggacgttt
gaagagatgacccaggaagggaaacctatgctggatggaaacttcctgtggtgcatggac
gacctgctgcctctcttcctctatgtggtgctcagggcgag
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integrated database retrieval system
