Notothenia coriiceps (black rockcod): 104956319
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Entry
104956319 CDS
T04920
Name
(RefSeq) integrin alpha-M-like
KO
K05718
integrin alpha L
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecule (CAM) interaction
ncc04517
IgSF CAM signaling
ncc04518
Integrin signaling
ncc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104956319
04517 IgSF CAM signaling
104956319
04518 Integrin signaling
104956319
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104956319
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncc04147
]
104956319
04515 Cell adhesion molecules [BR:
ncc04515
]
104956319
04090 CD molecules [BR:
ncc04090
]
104956319
Exosome [BR:
ncc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104956319
Cell adhesion molecules [BR:
ncc04515
]
Integrins
Integrin alpha subunits
104956319
CD molecules [BR:
ncc04090
]
Proteins
104956319
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
ITGAX-like_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
vWA_Rv0959
Motif
Other DBs
NCBI-GeneID:
104956319
NCBI-ProteinID:
XP_010782102
UniProt:
A0A6I9P1Q8
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MLGRRRIFLTFMVAAATYVSLAFNIDMTKPVVYVGEQKDFFGYKVLQYSSGTNKGIIATA
PLRQNGSGAICKSHQNQTFRCTNPQDISLTNTSVKHLGLSLAKDSKRSQFTVCSPSVVHE
CYENSYMNSVCFNIADNLQQTSSFTSAFQDCTKKTVDLVFLFDGSGSMTEGEFNKNKDFI
VDIINSLKNSSIKFAAVQFSFTNRNVFDFNDYQAGSYLEKLMKEPHMRKLTNTHNALTYV
LDDILKNPKAGASPDATKVVVLITDGDPSDRDRGIIKRYDDQNIIRFVIGVKDAKLEKFR
AIASEPKDKNAFKIENYDGLKGVLESFQKKIFQMEGSKVSRAGELNNEMSQSGFSAAFFN
DTLILGSVGSNSWRGSLQDRRGEIETQIEDPHMLDDSYLGYSISVGKKNNAPIYFAGAPR
FNHTGQVVLFRHEGKNWTAFQRVNGEQIGSYFGAELCSVDTDSDGNTDFLLVGAPQFYQP
QEKKEGQIYIYTLTDEMQLKGELTVTAPSMGRFGTTISSLADLNGDGLRDVAVGAPLEDN
NSGVVYIYLGDRIRGIRSDYSQRIIGHKIDLRLRFFGQSIDGDIDLGEDELPDIVVGSQG
IAVVLRSRPVFNVMASLYFQPKEINTDKIECLGNTDANVPMVNLTACFEMVETTSKAEEM
SSTLNISYSIDVDPTRTMYRGFFSETNRKARNLTSTPELRKKDTCFNHYIYMQPTHALTS
RLPFMNVLTESTRPTLHSCNDLEGVLNKTICGVSRPVFRSRSSATFRASFRIINEYEWND
TIVMTITGKSENTNSNHTNTLTKDIPVQFEIKMAVTVKEDLISYLNFTTEDTGPKQIVTT
YKIGNLGFKDFPVNLSLFFPTKLGHNFEMTNYQVIVQQNKTQCSRKTDKESEYCSPEEQC
KVILCDSFILEKESPTEITLIGDVQFRDLKQHAANIAFLKRYTGDSAEVKFKSFIEVDYD
NHRYVLSSYKKVEKSDNDPTRKWMEVRVEFIIPPDELLIILTGCGVGLLLLIIITVIMFK
LGCFKRKTLEYYQEQEEEALQAAPLAPTNETVSQSETDDKSDQLAEENMLLDDGEASGSS
PPTDTMEVLE
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggcgacgtcgcatcttcctcaccttcatggtggctgctgccacctatgtttct
ttggctttcaatattgacatgacaaaacctgttgtctatgttggtgaacaaaaggatttc
tttggatataaagtacttcaatattcgtctggcacaaacaaagggataatcgcgacagca
ccactgcggcaaaacggatctggagcaatatgcaaatcccaccaaaaccaaacttttcgg
tgcaccaaccctcaagatatttctctaacaaacacatccgtcaaacaccttggcctctcg
ttagcgaaagactccaaacgatcccaattcacagtctgcagtccaagtgtagtccatgag
tgttatgagaactcctatatgaacagcgtgtgcttcaacatcgcagataatcttcagcaa
acctcctctttcacatctgctttccaagactgcacaaaaaagacagtggatcttgtcttt
ctgtttgatggatccgggagtatgaccgaaggagaattcaacaaaaataaagatttcata
gtggatataataaacagccttaagaactcatcgatcaagtttgcggcggttcagttctcc
tttactaacaggaacgtgtttgacttcaatgactaccaagctggtagttatctggaaaaa
ctcatgaaagaaccccatatgagaaaactcaccaacacacacaacgctctgacatatgtg
ctggacgacattttgaaaaacccaaaagcaggcgcctctcctgatgcaactaaagtggtg
gtactaataacggatggagatcccagtgatagagacagagggattattaaaagatatgat
gatcaaaacatcattcgctttgtcattggggtcaaagatgctaaactggagaaattcaga
gccattgcttcagaaccgaaagacaaaaatgccttcaaaattgagaactatgacggactc
aaaggagtactggaaagctttcaaaaaaagatctttcaaatggaaggctccaaagtgtct
cgggctggagaattgaacaatgaaatgtctcagagtggattcagtgctgccttcttcaac
gataccctgattctgggctcagtgggatcaaacagctggcgtggttctctccaagatcgc
cgtggagaaatagaaacacaaattgaagatccacacatgctggatgactcctacctggga
tactctatttctgttggaaagaagaataatgctccaatttatttcgcgggggcaccaaga
tttaatcacacaggacaggtcgtacttttcagacatgaaggcaaaaactggacggcattc
caaagagttaacggggaacagattggctcctactttggcgcagagctgtgctcagtagac
acagactcagacggtaacactgatttcctgctggtgggagctccacagttttaccagcct
caggagaagaaggaaggtcagatctacatctacacactgactgatgagatgcaactgaaa
ggtgaactgactgtgactgcaccctccatggggagatttggcaccaccatatccagcctt
gccgatctgaatggagatggactgcgagatgttgctgttggagctcctcttgaggacaat
aacagcggggttgtgtatatctatcttggcgacagaatcagagggatacggagcgattac
agccagagaatcattggtcataaaatagatctccggctgagattctttggacagtccatt
gatggggacattgaccttggagaggatgaactcccagatattgtggtgggatcacagggc
atagctgttgtgttaaggtccaggcctgtctttaatgtcatggcttctctgtattttcaa
cctaaagagataaacacggacaaaattgagtgccttggcaacacagatgcaaatgtacca
atggtaaacctaacagcctgctttgaaatggtagaaacaacaagtaaagcagaggaaatg
agctccacgttgaacatctcgtactcgatcgacgtggatcccacgagaactatgtatcga
ggtttcttcagtgaaaccaaccggaaagctagaaatctcacctctacccccgagctgagg
aaaaaagacacctgcttcaaccactacatctacatgcagcctacacatgcactcacctcc
aggcttcctttcatgaatgttcttacagagtcaaccagaccaacgctccacagttgtaat
gatctagaaggagttctcaacaaaacaatatgtggtgtcagccggcccgtgtttcgcagc
agatcctccgcaacatttagagcttctttccgcatcataaatgagtacgagtggaatgat
acaattgtgatgaccataactggaaaaagtgaaaacacaaactccaaccataccaatacg
ttgaccaaggacatcccagtacagtttgaaatcaaaatggcagtaacagtgaaagaagac
cttattagctatctgaacttcacaacagaggacactggacctaaacaaatagttactaca
tataagataggtaatcttggttttaaggactttcctgttaatttgtccctgttcttccca
accaaactgggacataactttgaaatgacaaactatcaagtcattgtccagcagaacaaa
actcagtgctcaaggaaaactgacaaagaatcggaatactgctcaccagaagaacagtgc
aaagtcattttatgtgacagtttcatcctggagaaagaatcacccactgagattacattg
ataggagatgtacagtttagggatctcaaacaacatgcagcgaatattgcttttcttaaa
cgatatactggagattctgcagaggttaaatttaaaagcttcatagaggttgactatgac
aaccaccgatatgtgctcagttcttacaaaaaagtggagaagtctgacaacgatccaaca
cggaaatggatggaagttcgagttgagtttataatcccaccggatgaactgctgatcatt
ttaactggatgtggagttggactcttgcttctgatcataatcacagtcatcatgtttaag
ttgggttgttttaagaggaaaacgctcgagtattaccaggaacaggaggaagaagctctt
caggctgcccccctagcccccaccaatgagacagtcagccaatcagagactgacgacaaa
tctgaccaactggcagaggagaatatgcttctcgatgacggcgaggcgagcggcagctcc
ccacccactgatacaatggaagtactggaataa
DBGET
integrated database retrieval system
