KEGG   Notothenia coriiceps (black rockcod): 104956419
Entry
104956419         CDS       T04920                                 
Name
(RefSeq) ras-related protein Rab-33B-like
  KO
K07920  Ras-related protein Rab-33B
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104956419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104956419
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncc04147]
    104956419
   04031 GTP-binding proteins [BR:ncc04031]
    104956419
Membrane trafficking [BR:ncc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    104956419
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    104956419
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104956419
GTP-binding proteins [BR:ncc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    104956419
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 SRPRB PduV-EutP G-alpha GTP_EFTU DUF3873 Septin AAA_16 RsgA_GTPase AAA_7 AAA_24 ATP-synt_ab NACHT AAA_22 TniB AAA_33 nSTAND3 AAA_5 AAA_25
Other DBs
NCBI-GeneID: 104956419
NCBI-ProteinID: XP_010782206
UniProt: A0A6I9P7J8
LinkDB
Position
Unknown
AA seq 132 aa
MESSLEFSSSLGSVSSLLTRCRTFKVLVIGDSGVGKTCLTHRLCAGDFPSRVEATIGVDF
RERLLDINGERIKLQLWDTAGQERFRKSMVHHYYRNVHAVLFVYDVTRPNSFSGLTAWIE
ECRQNSLGQDIP
NT seq 398 nt   +upstreamnt  +downstreamnt
atggagtcatctctggagttctccagctctctgggcagtgtgtcctcgctgctgacccgc
tgtcggacctttaaggtgcttgtgataggagactccggggtggggaagacctgcctcaca
caccgactctgcgccggagacttccccagcagagtggaggccaccatcggcgtggacttc
cgcgagaggcttctggatatcaacggagagagaattaagctccagctgtgggacacggca
gggcaggagcgtttccgtaagtccatggtgcaccactactaccgtaacgtgcacgctgtg
ctcttcgtgtacgacgtcacccgtcctaacagcttcagcggcctgactgcgtggatcgag
gagtgcaggcagaactccctcgggcaggatatccccag

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