Notothenia coriiceps (black rockcod): 104956651
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Entry
104956651 CDS
T04920
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104956651
Membrane trafficking [BR:
ncc04131
]
Protein recycling
Others
Others
104956651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BiPBP_C
AIF-1
Motif
Other DBs
NCBI-GeneID:
104956651
NCBI-ProteinID:
XP_010782472
UniProt:
A0A6I9P2U1
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MERRLGHYVFIFFSKWIWLFTLTSILGGTKGEIRCIPSCQLPLITEFPRDLSELDFTNFG
EASAEELVGFTEGSPGAKPNAGGEEKHTVAESTASEESSSKVQPRSGGNKSSCPQKDALN
DKQKLSHPKEFTGSASPAAAPSPCNGNVTENSTGDGKHNEENDGEHVDVTVNEDNDVASW
RRTRSARSAEAWSGFRAEDGEDVSFSDLEELELTSSTFALAGDTAHNQAMVHWSGQNSSV
ILMLTKYYDFNSGRVTESSLWRSTDYGSTYEKLNEKVGLKTILSYLYVSPNNKRKIMLLT
DPEVESSLLISLDEGATYQKHSLAFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGRRWQ
LVHDSVVPNRFYWSRLGLDKEQGMIHLEITISDGRSQYITCKLQNCSDGNKGKPFPGFII
PNSLVVQDEYVFIQVPVGGQSVHYVSYKRNAFYPMKLPKYTLPKCQHFLEMDTHPLPHLT
LEKDLQIISTDDNQVVAAIQDWHQNDSYNLYMSESRGLFFTLMLENVVSSGGPEGNIMID
LYEVAGIKGVFLSNKVVENQVKTYITYNKGRDWRLLQAPTTDLQGNKVYCEQPYCSLHLH
LHVSENPYTSGNIVSKDSAPGIIIASGVVGPELTSNNVSIFITSDAGNSWREVFQEEYSL
FFLNQGGSLVAIRHTPLPIRHIWLSFDEGRSWDKYSFTSSPLYVDGVLGEPGEDTLIMTI
FGHFSHRSEWQLVKIDFQSIFKHRCTSEDYMTWQLHNEGEVCIMGMKRIFQKLKANVRCV
NTRNQYISQMSDSCPCTEADFECDYGFERQIDGRCTPAFWFVPSATSRDCIRGESFLNTT
GYRRGLSNNCTEGTLLKYSPRRQKCPSHAPRGLQLFTSEGTLVAALERNVTFLVFLEEGL
GSMTSITVDFGDGTAISYVNISSIDDGVKHIYSRVGIYHISATASNSLGFDRVLLFLHVT
CQLEQIQLLAPSVVVKNKAINLTTVLRPSNVGTVSYYWWFNNKTEPVVTLDGTMSFTFSK
EGSHTVTVQASVGNTVRQDQMTVAVYDYFRSHILGFSSHLDELNPGVSEWREDISRVVKN
SMVQVTGINKGQLLVTVLPGLPTTAEIFILPEKRPRVGGMDEKWAHLDQLSQVLLSALNQ
DLIQFTLKPGVQVNVYATQLSPAPLVDSSDSGHSSTAVIMLVSVVLMGLAVFLIYKFKRK
IPGIITYTAEQPDKEQEVIPTVTSIAIPNPEGDQLTSLDRVDVQLDSKGRGYLPSHTDIK
LSDEAPHVF
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtcgtctcggtcactacgtttttatctttttctctaagtggatttggctcttc
accctaacttccatcctgggcggaacaaaaggggagataaggtgcattccctcgtgccag
ctaccgctaattacagaatttccccgggacctctcggagctggatttcactaactttggc
gaggcatcagcggaagaattagtgggatttacggagggatcaccgggcgccaaacccaac
gccggcggggaggaaaagcacacggttgcggaatcaaccgcaagcgaagaaagttcgtcg
aaagtgcagcctcgctccgggggaaataaatcaagctgtccccagaaggacgctttgaac
gataagcaaaaactttcccacccgaaagagttcactggaagtgcttcacccgcggctgcc
ccttccccctgtaatggtaacgtaaccgaaaatagcaccggagatggaaaacataacgag
gaaaacgatggggagcatgttgatgtgacagttaacgaggataacgatgtggccagttgg
agacgaacccggagtgcgaggagcgcggaggcttggtccgggttcagagccgaggacggg
gaggacgtctcgttctcggacctggaggagttggagctcacaagttcgacatttgctctc
gccggggacacggctcataaccaggccatggtgcactggtccggacaaaacagcagcgtg
atcctcatgttgacaaagtactacgacttcaactctggcagagtaacggagagttcatta
tggaggtcaacggactatgggtcgacatatgagaagcttaatgagaaagttgggctaaaa
accatcctgagctacttgtatgtgagtccgaacaataaaagaaagatcatgttacttacc
gacccggaggtggagagcagcctgctcattagccttgacgagggggcgacctatcagaaa
cacagcttagcctttgatatcctcagcctgctgtttcaccccgagcaggaggactggatc
ctggcttacagccacgaccaaaagctctacgtctctgttgaatttgggaggagatggcag
ctcgtgcatgacagcgtcgtccccaacagattctactggtccaggctgggcttagacaaa
gagcaagggatgattcacctggagatcaccatctctgacggaaggtcacagtacataact
tgtaaacttcagaattgctctgatggaaacaagggcaagcctttccctggatttatcatc
cctaattccctggtggttcaggatgaatacgttttcatccaggtgccagtaggtggtcag
tctgtccattatgtgtcctataaaagaaatgctttctacccaatgaagcttcccaagtat
actctgccaaagtgtcaacatttcctcgagatggacacacatcccctacctcacctcact
ctggaaaaggacctgcagataatcagcacagatgacaaccaggtggtggcagcgattcag
gactggcaccagaacgactcctacaacctgtacatgtctgagtccagagggctgttcttc
accctgatgctggagaacgttgtgagcagtggaggaccggagggcaacatcatgatagac
ctgtatgaggttgccgggattaaaggggtgttcctgtcaaataaagttgtagagaaccaa
gtgaaaacttatatcacatacaacaaaggcagagactggaggcttcttcaggctccaacc
accgatctccagggaaacaaggtctattgtgaacaaccttattgttcgctacatctccac
ctccacgtgtcagagaatccctacacctcgggaaacatcgtcagcaaagattcagctccg
ggaataatcatagcgtcaggtgttgtcggaccagagctgaccagtaataatgtcagtatt
ttcatcacatcggatgctggaaacagctggagagaggtttttcaggaagaatacagcttg
tttttcctgaatcaagggggatctcttgtggccatccggcacacaccgctgccaattaga
cacatttggctgagttttgatgagggcagaagctgggacaaatatagcttcacctcctct
ccgctgtatgttgacggggtgctgggggagcctggggaggacaccctcataatgacaatc
tttggtcattttagccatcgatctgagtggcaacttgtcaaaattgacttccagtccatt
ttcaaacaccgctgcacatctgaagattacatgacatggcagttacacaatgagggcgaa
gtgtgcatcatgggaatgaagagaatcttccaaaaactgaaagcaaacgttcgatgtgtc
aacaccagaaatcagtatatttcccagatgtcagactcctgcccgtgcacagaggcagat
tttgagtgcgactacgggtttgagaggcagattgacgggcgctgcactccggcgttctgg
tttgttccttcagcaacatctagagactgcatcaggggggagagcttcctcaacaccaca
ggataccgccggggtttgtctaacaactgcacagaggggacgctgttgaagtacagcccc
aggcgacagaagtgtcccagccatgccccccggggcctccagctcttcaccagcgaggga
acactggtagcagcgctggagaggaatgtcactttcttggtctttctggaagagggtctc
ggctccatgacaagtataacggtggactttggcgacgggacggctatatcatatgttaac
atcagctccatcgatgacggggtcaaacacatctacagcagagttggcatctaccacatt
tctgctacagcaagcaactctctgggctttgacagggtcctactcttcctccatgtcacc
tgtcaactcgaacagattcagctcttggctccttcagtggtcgtcaagaacaaagcgata
aacctcacgacggtgttacggcccagcaatgtgggaacagtcagctattactggtggttt
aataacaaaacagagcctgttgtgactctggatggaacgatgtccttcactttctccaag
gagggaagccacactgtcaccgttcaggcttcagtcggcaatactgttcgacaggaccaa
atgactgtggccgtttatgattatttccggtcccacattttgggcttttcttctcatttg
gacgagctgaaccccggggtgtcagagtggagagaggacatcagccgagtggtgaagaac
tccatggtccaggtcacgggaatcaacaagggacagctcctggtcacagtgctccctggt
ttaccaacaacagcagagattttcatcctgcctgagaagaggccaagagtcggaggcatg
gatgaaaagtgggctcacctggatcagctttctcaggttctgctaagtgctctgaaccaa
gacctcatccagttcacactcaagccgggggtgcaggtgaacgtgtacgccacacagctg
tctccagctcctcttgtggacagcagtgatagcggccatagcagcactgcagtcatcatg
ctggtgtcagtcgttctgatgggcctggctgtctttcttatatataaatttaaaaggaag
atcccgggcatcatcacttacacagcggagcagcctgacaaagaacaagaggtcatcccc
acggtaacctccatcgccatcccaaaccctgagggggaccagctgacctccctggatcgg
gtggatgtacagctggattcaaaaggcagaggctacctgccatctcacacagacatcaag
ctctctgatgaagcgccccatgtgttttaa
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