Notothenia coriiceps (black rockcod): 104956697
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Entry
104956697 CDS
T04920
Symbol
dhx37
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncc03009
]
104956697 (dhx37)
Enzymes [BR:
ncc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104956697 (dhx37)
Ribosome biogenesis [BR:
ncc03009
]
Eukaryotic type
90S particles
Helicases
104956697 (dhx37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
HA2_N
AAA_19
ResIII
nSTAND3
AAA_30
ATPase
Flavi_DEAD
AAA_23
FtsK_SpoIIIE
DUF4746
Motif
Other DBs
NCBI-GeneID:
104956697
NCBI-ProteinID:
XP_010782527
UniProt:
A0A6I9P2Y7
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MWDARIGGVRSLAACVLDHGWESVEGVVLSRKEERQFKMGKLRRKFNWKGRLQNDTQQPA
EEGKTNVVVELQDGSRLKGVDQSNPLVLTANKAKKKKGSLTPLSRKKPLTKKQRKELQKV
LERKDKKSQRADILTKLAEVQVPESELKLLYTTSKLGTGDKLYQTKQLPDEIKDGESAPK
ISSLSGANRKRKWKEEMDEDEVEESSDLDTSSEEEEEEEEEEVTETTEMTAAPPQETEDK
QEVQEKPHQTEQDGQNEKNISNQEKFEKKMLSQPAVFIPVNRLPEIQEARLKLPVLAEEQ
VIMEAVRENPFIVICGETGSGKTTQVPQFLYEAGYASGSGIIGITEPRRVAAVSMSQRVA
KEMNLSTRVVSYQIRYEGNVTGNTKIKFMTDGVLLKEIQKDFLLQRYSVIIIDEAHERSV
YTDILIGLLSRIVPLRNKKGLPMKLLVMSATLRVEDFTENTKLFRTPPLVIKVEARQFPV
SIHFNKRTPMDDYTGEVFQKTCKIHRMLPPGGILVFLTGQAEVNNLCRQLRQAFPLRRGN
TTNGEDEDADTSEAMRTFKKTKQKKTVSLPRIDLDNYSALPVDEGDEDRDAGIGDEEYGG
SDLEFGDDPASTEVKADPSIPLYVLPLYSLLDPEQQAKVFRPPPPGARLCVVATNVAETS
LTIPGIKYVVDCGRVKKRFYDRVTGVSSFKISWTSQASANQRAGRAGRTEPGHCYRLYSS
AVFGDFSLFSEAEITRRPVEDLVLQMKDLNIDKVVNFPFPTSPSTEALVAAEQLLVSLGA
LKEPLRTGSLKQMELARLSCPITPLGRAMASFPVAPRYAKMLALGQQQDCLPYVIAVVAA
MTVREIFEDLDRTAASEDESVKLAQRRARLNQMRRLWAGQGASLLLGDLMVMLGAVGACE
FAGCTPKFCEENGLRYKAMVEIRRLRGQLTNAVNSVCPEVGVFVDPKMAPPTEHQVVCLR
QIVLAGLGDHLARRAQAEDILDQKWKMAYRTPLLDDPVFIHPHSALFKTLPEFLVYQEIM
ETTKMYMRGVSAVEAEWIPELLPQYCHFGSPLESPSPWFSLSTGTIKCHCSSTFFRIAWP
LPAVEKEYPEGLERYKLFSKFLLEGQVCPKLKKNGTHLLSNPSIMLKSWAKLQPRTEALL
GVLVSKRVDCRDALLSVWKDDEKFLLSAYCQWLPEAMHQEVAKSWPPI
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatgccaggattggtggggtgaggagtctggcggcttgcgttctggaccacggc
tgggagtctgttgagggtgttgtgctgagccgaaaggaggaacgtcagtttaaaatggga
aaactaaggaggaaattcaactggaagggaagactgcaaaatgacacccaacaaccagct
gaggaagggaagacaaacgttgttgtagaacttcaagatgggtccagacttaaaggagta
gaccagagcaacccgttggtcctcacagccaacaaagccaagaagaagaaaggctcactg
acgcctctctccagaaagaagcccctcaccaagaagcagaggaaagagctgcagaaagtg
ctggagcgcaaagacaagaaatctcagagagcagacatcctgaccaaactggccgaagtg
caggtcccagagtctgaactcaagctgctgtacaccacgtccaaactgggaacaggagat
aaactttaccagaccaaacagttaccagatgaaataaaggatggagagtctgcgccaaag
attagcagtctcagtggagcaaacagaaaaagaaaatggaaagaagagatggatgaagat
gaggtagaagaaagcagtgatctagacacctcatctgaggaggaggaggaggaggaggag
gaagaagtgactgagaccacagagatgacggccgctccacctcaggagacagaagacaaa
caggaggtgcaggaaaaaccacatcaaacagaacaagatggacagaatgaaaagaacata
tcaaatcaggagaaatttgaaaaaaaaatgctgtcgcagccagccgtcttcattcctgtg
aacagattaccagaaatacaggaggctcgtctgaagctgcctgtgctggcggaggagcag
gtcatcatggaggcagtgagagaaaacccctttatcgtcatctgtggagagacaggaagt
ggaaagacaactcaagtgcctcagtttctgtatgaagccggctatgccagtggcagtgga
ataattgggatcacagaaccaagaagggtagcagctgtcagcatgtcccaaagagtggct
aaagagatgaacctgtcaacacgggtggtgtcttaccagattcgatatgaggggaacgtg
accggcaataccaagatcaagttcatgacagatggtgttctgctgaaggagattcagaag
gatttcctgctccagagatacagtgtgataattatagacgaagcgcacgagaggagtgtg
tacacagacatcctcattggactgttgtctcgtatcgtcccgctcaggaacaagaaaggt
ttgcccatgaagctgctggtcatgtcggctactctgcgagtggaggacttcacagaaaac
acaaagcttttccggacgccgccacttgtcattaaggtggaagctcgccagttccccgtc
tctatacacttcaacaaacgcaccccgatggatgattacaccggagaagttttccaaaaa
acctgcaagatccaccggatgctgcctccaggtggtatcctggtgtttctgaccgggcag
gcagaggttaacaatctgtgcagacaactgagacaagcttttcccttacggaggggtaac
actactaatggtgaagatgaggacgcagacacctcagaggcaatgaggacgtttaagaag
accaaacagaagaagactgtttctctgcctcgcatcgatctggataactattccgccctc
ccggtggatgaaggtgatgaagacagagatgcggggatcggagacgaagagtatggcggc
tccgatctggagttcggagacgatcccgccagcacagaggtgaaggctgacccctccatt
cctctctatgttctccctctgtactctctgttggacccagagcagcaggccaaggtgttc
aggcctcctccacctggagctcgtctgtgtgtggtagccaccaacgtggccgagacatct
ctgaccatcccgggcatcaagtacgtggtcgactgtggccgtgttaagaaacgtttctat
gaccgagtgaccggagtgtcgtccttcaagatctcatggacctcacaggcctcggccaat
cagagggcaggcagagcgggacgaacagagccgggacattgctacaggctgtactcgtct
gcagtatttggagacttcagtttgttctcagaggcagagatcacccgccggcctgtggag
gacctggttttacagatgaaggacctcaacatagataaagtggtgaatttccccttcccc
acgtctccctctacagaggctcttgtggcagcagagcagctgttagtctcactgggagct
ttgaaagagccgcttcgcactggaagtttgaaacagatggagttagcaagactgagctgc
cccatcacccccctgggcagagcaatggcttcgttccctgtggcaccacgctacgctaaa
atgttagctcttggtcagcagcaggactgccttccttacgtcatcgctgtggtagcagcc
atgacagtcagggagatctttgaagacctagacagaactgctgctagtgaagatgagagc
gtgaagcttgctcagcgccgagctcggctgaaccaaatgaggcggctgtgggctgggcaa
ggagcgtccctcctactgggggacctcatggtcatgctgggtgctgtgggagcttgtgaa
tttgctggttgtactccgaagttttgcgaggagaacggcctgaggtataaagccatggtg
gagatcaggaggctcagaggacaacttaccaatgcagtgaactcggtgtgtccagaggtg
ggagtgtttgtggatccaaagatggccccgcccacagagcatcaggtggtgtgcttgcgg
cagattgtcctggctggactgggagaccatctcgcacggcgagcacaggcagaagatata
ctcgaccaaaaatggaagatggcatacaggacgcctcttctggacgacccggttttcatt
catccccactctgcgctcttcaaaacgctgccggagttcctcgtctatcaggagatcatg
gagaccacaaagatgtacatgagaggtgtgtcagcagtagaagccgagtggattcccgag
cttctgcctcagtattgtcattttggctcccctctggagtctccgtcaccgtggttctct
ttgtccaccggcaccatcaaatgtcactgctcaagcaccttcttccgtatagcttggccg
ctgccagcagtggagaaggaatatccagaaggactggagcgttacaaactgttctccaag
tttctgcttgagggacaggtttgtcctaaactgaagaaaaacggcacccaccttctctca
aacccatccatcatgctgaaatcatgggcaaagctgcagcccaggacggaggctctgctg
ggagtgttggtgtcaaagagggtagactgcagggatgccctcctctctgtctggaaagat
gacgaaaaatttctgttgtctgcatactgccagtggttaccggaagccatgcatcaagaa
gtagccaaaagttggcctccgatctga
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integrated database retrieval system
