KEGG   Notothenia coriiceps (black rockcod): 104956731
Entry
104956731         CDS       T04920                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104956731 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncc03041]
    104956731 (bcas2)
   03400 DNA repair and recombination proteins [BR:ncc03400]
    104956731 (bcas2)
Spliceosome [BR:ncc03041]
 Complex B
  Other components
   Prp19 complex
    104956731 (bcas2)
 Complex C
   Prp19-CDC5 complex
    104956731 (bcas2)
DNA repair and recombination proteins [BR:ncc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104956731 (bcas2)
SSDB
Motif
Pfam: BCAS2
Other DBs
NCBI-GeneID: 104956731
NCBI-ProteinID: XP_010782564
UniProt: A0A6I9NX47
LinkDB
Position
Unknown
AA seq 140 aa
MAGTASVAGEVFVDALPYFDQGYDAAGVREAAGALVEEETRRYRPTKNYLSYLTIPDFAT
FETEIMRNEFERLAARQPMELLSMKRYELPAPSAGQKNDITAWQECVNNSMAQLEHQAVR
IDNLELMSQYGTNAWKVYNE
NT seq 423 nt   +upstreamnt  +downstreamnt
atggccgggacggcttcagtagctggtgaagtgtttgtcgatgccttgccatattttgac
caaggctacgatgcagcaggtgtgcgagaagcggctggagcgttggtggaagaggagacc
aggagatacagaccaacgaagaactacctgagctacctcaccatacctgactttgctact
tttgagacagaaattatgaggaatgaatttgagcggctggcggctcggcagccaatggaa
ctcctgagcatgaagagatatgagcttccagcaccgtcagccggacagaagaatgacatc
acagcctggcaggagtgcgtgaataactcaatggcccagctagagcaccaggcggtccga
attgataacctggagctcatgtcgcagtacggaaccaacgcgtggaaagtctacaacgag
taa

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