Notothenia coriiceps (black rockcod): 104956788
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Entry
104956788 CDS
T04920
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104956788
Membrane trafficking [BR:
ncc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104956788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank
Ank_2
C1_2
Ank_5
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
104956788
NCBI-ProteinID:
XP_010782624
UniProt:
A0A6I9NX98
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MELSRRNVPLYGQAKVFALLDGFDSLPEDAEVYVVLEGSTLVHVTRALSDVMLCFIVPGH
NLAEVVSVQAYLCSETTPLTWVGGASLEYVQDDAQDLAEHLVVHGHCLSSRDHKDLSSLF
NLGQQSSRWAMDRRVALAMANLDIPQNWNVLGSHSGDEHSFRESPLHMAVRWGLYRLAEL
LLCQPGGLMAVSLPNEEGVTPLQLAQTAGNTELLELLTHPPNPLATPPAGLSQVWADRSR
LLRFCHDMGNLTLTVRQNLRWSSEDSRHADILLLRDRLRDEDFLREIKALRRERVETLSG
KEELVDDPVETALYSDMKRAAVEENDYEELLMFCLHEEDEVDDPSHFDSEKSQSIGESPA
RSPTLAAAARLSAMIHGKDRVYANAMLVDQVDEADIKYRSPGEEEGSPAPHLGSPCWDPF
SMTPPDSGNCSQNRHPSSPHNEERGIQGPGLENHREPSPRMSPPCPFASSPSFPSSPLAS
AFRMFEGAQRRQTQPGLPVSPALNRRGCSLTETSRGLSPSLECDSGEEDILGYSYPCSSV
KKQSILRSSSGEERDFFETSPDFNRTLSDSTDTSAKNPEKAEVRLRSYSYSSPKVKPSRP
LLNQDATITDLAEDGAFSSSGRSLLQALSLSKSFSRLNQVKQRAFTLTETTREQRILGFR
KRAQSAEEESSASLQHLTLTEFLKEIEDEEWDKYIIPSKVESEKYKVSRTFSFLKSRMSS
TRNKTKVKGKEVKEGKEKPGAANGHQFVPVSPSGPALCVACEKSVSGKELLQCSSCFLNV
HKNCRESVAACGKKPQERNAMLMKSKTMSLPNNSVKENSQAFSSSSTLPTTTRERRETVA
PLSKSLSISIDTRRLSDAAGADAECSVTACTNNSLSDEGTPVTANPPPTEPPITTQDVDA
PPLMSDLSAELLGLDVESWSLAVSKEFCRPLDRRTTKRQDVIYELMQTELHHIQTLTVMS
EVFRRGMLEELQLDLDCVARIFPCLDPLLLFHKNLFGALQERRQAATQPENPRNYLIHHI
GDILLQQFSDENAEKMKQVYGEFCSHHTDAVNVFKELQQQNKKLQNFVKQQSNNTLVRRR
EVPEFILLVTQRITKYPVLLERILHYTQEGGQEHSDLSRALAQIRDIIAAVDLTVNKYER
CQEMQEVLTRLENKSFAKLKNDKVFRKQDLHSKHRELHYKGLVFWKTATGRLKDTLALLL
TDVLVFLQEKDQRLVFAAVDQKPPVIPLQKLIVREVANEERGMFLISASSVGPEMYEVHT
TTRDERNAWMRHIRKAVESCPEEEEEEEHSAETEEARRVAEVRVQKITKFQETLFSQDQQ
ICSSLEEKLQLYAELTELTLCSPEPVLQRHLLVQPDANTEPQASSLLAAALREAENLITM
LQARDGLSVKSQSSPLRGPECFSYNSHGSSIQESPSEPDYLSTLSLSSTSLGSDSEMTGL
DNAVWSSAVELKKGDSKGTLSKVSESVHGLTQLLYSLQAAVTLQDSCCEVQKLLLQEGER
PQPRTLSSLQNSLEQEKQRSIDKKKEDVEKKGLERKKEEVDEVKKLHVKLKQEQQRWDKE
CLVREKQQCEQESVLEQREQQCLLEAERLRCEREELEAQLQEYQQNLDRLREGQRSVERE
KEQVEAQQRQLQRWRHTRQSSLPVSIPLDVYKSQMPSHSRSGSLDGNSSVFQNEAVLLAS
LQQNRLHQPPNNNQRLLSAPRRSQDIPLRSSSYTANLGLSASLYNSLNTLLSQAHSKQPA
EGLTYPNYSNPHAVPRPLNVHPFSNRITAQPQMTNNTDFSQSFDRPSPGAWRSEVTGHRL
YEDGYSSSPSLTPLLPPQAYLSLEGQNGEEGVEENIVYL
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagcaggaggaacgtgcctctatatggccaggcaaaagtatttgcactgctg
gatggttttgactcgctgcctgaggatgcagaggtctacgttgtcttggaaggatccaca
ctggtccatgtcaccagggctcttagtgatgtcatgctctgctttatagttcctggtcat
aacctggctgaggtggtgtctgtgcaggcctacctgtgttctgaaaccacacccctcacc
tgggtgggcggggcttctctggagtatgtccaagatgatgctcaggacctggcagagcac
ctggtagtccacggacattgccttagctccagggatcacaaagatctgagcagcctcttc
aatctgggccagcagagctctcgctgggctatggatcgtcgcgttgccctggccatggca
aatctggatatcccccaaaactggaatgtactagggagccacagcggagatgagcacagt
ttcagggagtctcccctccacatggccgtgcgatggggtctgtatcggcttgcagagctg
ctgctttgtcagccggggggtctgatggctgtcagcctgccaaacgaagagggagtgaca
ccgctgcagctggcacagacagctggcaacaccgagctcctggagctgctcacacacccc
cccaaccctctggccacgcctccagcaggtctgtcccaggtgtgggccgaccggtcccgc
ctgctcaggttctgtcatgatatggggaacctgactctgaccgtccgacagaacctgagg
tggagctcagaggacagtcgacacgctgacatcctgcttctcagagaccggctcagagat
gaggactttctcagagagatcaaagctctcaggagggaacgtgtggagaccctctcgggg
aaggaggagctggtggatgatcctgttgagaccgcactgtattctgatatgaaaagagct
gctgtagaagaaaatgactacgaggagctgctgatgttttgcctgcatgaagaggacgag
gtggacgacccatcacactttgactctgagaaaagccagtccataggggagagcccggcc
cgctcccccactctggctgctgccgccagactgtcagcgatgatacatggcaaagacagg
gtgtacgctaacgccatgctggtggaccaggtggatgaagctgacattaaataccgctct
cccggggaggaggaagggagccctgcgccacatcttggcagcccgtgctgggaccccttc
tccatgaccccccctgactcagggaactgttcccaaaaccggcacccgtcctcaccccat
aatgaggagaggggaattcaaggccctggcctggagaatcacagggagccatcccctcgc
atgtctcccccatgtccctttgcttcctccccgtcttttccttcctcccccctggcttcc
gccttccgtatgttcgagggagcgcagaggcgtcagacgcagcccggtctgccagtttct
cctgctttgaaccgcagaggatgcagcttgaccgagacgagccggggcctgagtcccagt
ttggagtgtgacagtggagaagaagacatactgggatattcctacccctgctcgtctgta
aagaagcagtccatcctgcgttccagctcaggagaggagagggactttttcgagacatca
ccagactttaaccgcacgctctctgacagcacagacacgtccgctaagaacccagagaaa
gccgaagttcgcctgcgctcctactcctactcctcccccaaagtgaagccgtcacggcct
ctgctaaaccaagacgcaaccatcactgacctggcagaagatggtgcattcagcagcagt
ggtcgttctctacttcaagctttatctctctctaaatccttctctcgtctcaaccaagtt
aagcagagagcattcaccctgactgagactaccagagaacagaggattttgggtttccgt
aagcgggcccagtcagccgaggaggagagcagcgcttcgctccaacacctcaccctcaca
gagttcctcaaagagatcgaagatgaggagtgggataaatacataatcccatcaaaggtc
gagtcagagaagtacaaagtcagccggaccttcagcttcctcaagagcaggatgtccagc
actcggaacaaaaccaaggtgaaggggaaagaggtgaaggagggaaaggagaagccagga
gcggctaacggacaccagtttgttcctgtgtctccctccggtcccgctctctgtgtggcc
tgtgaaaagtctgtttctgggaaggagctgctgcagtgctccagctgtttcctgaatgtc
cataaaaactgtcgagagtctgttgccgcctgcggaaagaagccacaggagaggaatgca
atgctgatgaaaagcaagaccatgtctctcccaaacaactctgtgaaagaaaactctcaa
gctttctcctcttcctctacacttcccaccacaaccagagagaggagagaaacagtcgcc
cctctctccaaaagcctctccatctctatagacaccaggcggctgagtgatgcagcaggg
gcggacgctgagtgcagtgtgacagcttgcaccaacaactcattgtctgatgaaggaaca
cctgtcactgcgaatcccccgccaaccgaaccgccaatcaccacgcaggatgttgatgct
cctcctctaatgagcgacctgtcagctgagctgctggggctggatgtggagtcctggagt
ctggccgtcagtaaggagttctgcaggccgctcgacaggcgcaccactaagcgacaggat
gttatttatgagctgatgcagaccgagctgcaccacatccagacgctgacggtcatgtcc
gaggtgttcaggagaggcatgctggaggagctgcagctggacctggactgcgtggcccgg
atctttccctgcctggaccccctgctgctttttcacaaaaacctcttcggagccctgcag
gaacgcagacaagctgcaacgcaacctgagaacccccggaattacctcatccatcacatt
ggagatattctgcttcagcagttctcagatgaaaacgctgagaagatgaagcaggtgtac
ggagagttctgcagccatcacaccgatgccgtcaatgttttcaaagagctgcagcagcaa
aacaaaaaactgcaaaactttgtcaaacaacagagcaataacactctggtccggcggaga
gaggtgccagaattcatcctgctggtcactcagcgcatcaccaagtaccctgtcctgctg
gagaggatattacattacactcaggagggaggtcaggagcactctgacctgtcgagggcc
ctggctcagatccgcgacatcatcgctgcggtggacctcacagtgaataagtatgaaagg
tgtcaggagatgcaggaagtgctgacccggctggagaacaagagcttcgccaagctaaag
aacgacaaggtgtttcgcaaacaggatctgcatagcaaacacagagagctgcattataaa
gggctggtcttctggaagactgccaccgggcgtctgaaagatactttggctctgctgctc
acagacgttctggttttccttcaagagaaagatcaacgtttggtatttgctgccgtggac
cagaagcctcctgtaatccctttgcagaagctcattgttagagaagtagccaatgaggag
agaggaatgttcctcatctccgcctcctcagtgggaccagagatgtatgaagttcacacc
accactagagacgagaggaatgcatggatgagacacatacgaaaagctgtagagagttgt
cctgaggaagaggaggaggaagagcacagtgctgagacagaggaggcccggcgggtggca
gaagtgagagttcaaaagatcacaaagttccaagaaaccctgtttagtcaggaccagcag
atctgcagcagcctggaggagaagttgcagctttatgccgagctgacagagttaaccctg
tgttcaccagagcctgtactgcagcgccatcttctggttcaacctgacgctaacactgag
ccgcaggcctcctcgctgctcgctgctgctctcagagaagcggagaacctgatcactatg
ctgcaggctcgtgacggcctttctgtaaagagtcagagctctccgctccgaggaccagag
tgcttcagctacaacagccatggcagcagcatccaggagtctccctctgagccggattat
ctgagcaccctcagtttgagctccacctctctgggatcagacagtgagatgacgggtctg
gacaacgcggtgtggagctctgctgtcgagctgaaaaaaggagactccaaagggacactc
tcaaaggtgtcagagagcgttcatggtctgactcagcttctctacagtctgcaggctgct
gttaccctgcaggacagctgctgtgaagtccagaaactccttctccaggaaggagaaaga
cctcagccccgaaccctctcatcgctccaaaacagtctggagcaggagaagcagagaagc
atcgataaaaagaaagaggatgtggaaaagaagggtttagagaggaagaaagaagaggtg
gatgaggtaaagaaactccatgtgaagctgaaacaggagcagcaacgctgggacaaagag
tgtctggttcgagagaaacaacaatgtgagcaggagagtgtgctggagcagcgggagcag
cagtgcctcctggaggccgagcggctgcgctgcgagcgagaggagctggaggctcagctg
caggagtaccagcagaacctggaccgcctgagggagggccagaggagcgtggagcgggag
aaggagcaggtcgaagcccagcagaggcagctgcagaggtggagacacacccgccagagc
agcctgcctgtcagcataccgctggacgtatacaagtcccagatgcccagccacagccgc
tcaggcagcctggatggaaacagctcggtgttccagaacgaggcggttttactggcctcc
ctccagcagaaccgcctccaccagccccccaacaacaaccagcgcctgctctctgcgccc
aggaggagccaggacatccctctgcgcagctccagctacaccgccaacctgggcctcagt
gccagcctctacaacagcctcaacaccctgctgagccaggcccacagcaaacagcccgcg
gagggtctcacataccccaactacagcaacccacacgcggtcccccggcccctgaatgtc
caccccttcagcaacaggatcactgcacagccacaaatgaccaacaacacagacttcagc
cagtcgtttgacagaccatccccgggtgcctggaggtcagaggtcacaggtcacagactt
tatgaggacggctactcctcgtctccctctcttactcccctccttcccccacaggcctac
ctctctcttgaaggacagaacggggaggagggagtcgaggagaacattgtttatctctga
DBGET
integrated database retrieval system
