Notothenia coriiceps (black rockcod): 104956968
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Entry
104956968 CDS
T04920
Symbol
rab11fip5
Name
(RefSeq) rab11 family-interacting protein 5 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104956968 (rab11fip5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104956968 (rab11fip5)
Membrane trafficking [BR:
ncc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104956968 (rab11fip5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
104956968
NCBI-ProteinID:
XP_010782856
UniProt:
A0A6I9P9P7
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIIQVGKEKYTTGLVEKAEL
PEWNEECCFELLPGILEAGGRGDYPPGSGDLLLTVMHRVLIGLDVFLGQAVIPLDRIFQE
GMCPRDEWFKLNSKAGRKEKDRGGLQATVQFTRNNMTASMFDLTIKDKPRSAFGKLKDRV
TGRKRGDMESSSAIVPGRFAALSGSLGQPFEEGGGGPAETRDVERAEEKRSKVKDFFKGR
LRKSSDTRSCSSLASESSVSSMASDNPGPPPSLDLMSDPPSSPIYTSRVRADTHYGETAL
AKKVLASQHTTNVFTHKRAFSDEASKITTAFPRPNLAVESLKGQTMTQSKSSLCINGSHV
YDSEPSTPKSLGAHQSRLVLLEKCSPLSRSLQNLTKRSEDKGNFTGGRRWSFDKTKKEEK
EDDKEAQASSPSNQQAQAETPSTSSASVSPDKGRKLRKTLFSGGRSDSLPAKSDMNQAGS
TSEGRLRGWFGSGESQNKPRLEVSPKVESSSDVPPPLPPRLYPQCSSPSAPPSGHTSPDD
CNHTNPFSPASPPISSSNPFPSQRNPFFEDLIAEESQRSPTFAPCTSSNSSPFHYTTLPC
TPSPARDVTATNMAHMKRERPRPVARQISLPAIIPKAAKTKPSAPRSMSECTGEWDDSFD
AFASSRLYSPQGSVPQKQRTSQPSPSDLPGNNNTHAHELQTCEEEPPPLPPRRPVRTSVN
EIYSDGWLHRGQELAVHKEAYLLSQTGVASLQRGREAESKRNSISPDPHTISETSDSLSA
NSQTYANITPPGFTTDEKLKRFKYEPLEDENHRWGGMLFEQDLYGRMCRGNYGPPKMNRL
SLKAEEIAGNNVTSVNSGPKILDSEVSVADLLNISCSSSKPDAKALEITTARVAEPESNP
LESTCINNNVSLSPTLEDLNMNVNNSDFGFIDSDSSSHSEVVDPLKGIRSFGGTFPQPPE
ASQIAAYHVETVTTPEELFTLKDTYIRERNSSFEIPASSSKLFKVPPVYQDNCHDQLNNS
RVSSREMTARNADNIKTESRGVTARSVADLKKTQKEFDDNGNPEAKTAALNQHDAFPGVV
SARLRPKGLSRQNSSGSPSNQSQNGDREFEQFLSLVQNISEVREGPSSYLPSKSALSSLL
SLVDSTTNQNESNETSQISSQDNTIVKSSDISFEDLHAKVAPNSRTPTKSKIGESLLEPS
FSSIPRTLSLSGDAQAKPHPTLFCCPSIHPSSMGPGAGASSTLAVAPYTSTTCNTDQPLV
DARHSLFPEETQPASSLPRQESRTHPVKPLTSSQSEKKEGRSVLEKLKSTIHPGRHAHQA
AAEPERSQEVRVDNTAHYQQLTNMELISLLLQQEMDMQKQDAASEQQAAQLHKCEADLKK
VKLQVRDLEDYIDNLLLRIMEQTPTLLQVKRHK
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcactgatagatctggacgatgatcagagatgggtgcccacccatgtgaatgtc
accgtgctccgggccagaggactgcgaaccaagggcaagcatggcagccgctacctctac
accatcatccaggtgggcaaggagaagtacacgaccgggctggtggagaaggcggagttg
cccgagtggaacgaggagtgctgcttcgagctgcttcccgggatcctggaggccggcggc
cggggagactaccccccggggagcggggacctgctgctgaccgtcatgcaccgggtgctc
atcggactggacgtgttcctcggacaagccgtcattcctcttgataggatatttcaggag
gggatgtgtcctcgagatgaatggttcaagctcaactccaaggcgggcagaaaggagaag
gaccgaggcgggctgcaggccacggtgcagttcactcgcaacaacatgaccgccagcatg
ttcgacctcaccataaaggacaagcctcgctctgcttttggaaagctcaaggatcgagtc
acagggaggaagaggggggacatggagtcttcctcagctattgtgcccggacgcttcgca
gccctgtcaggatccctggggcagccgtttgaggaggggggcggagggccggctgagact
cgagatgtggagagagcagaggagaagaggagcaaggtgaaggacttcttcaaagggagg
ctgcgaaagtcgtctgacaccaggtcgtgttcctccctggcttcagagagcagtgtgtct
tccatggccagtgataaccccggccccccacccagcctggatctgatgtcagaccctccc
agctctcccatctacaccagcagagtgagagcggacacccattacggagagacagcttta
gctaaaaaggtgctcgccagccagcacaccacaaatgttttcactcacaagcgggccttc
agcgatgaagccagtaagatcacgacagccttccctcgcccaaaccttgcagtggagtct
ctgaagggtcagaccatgactcagtccaagtcttccttgtgtataaacggcagccacgtc
tacgactcggagccatcgactccgaagagcctcggagcccaccagtccaggctggtgctg
ctggagaaatgctccccgctgtctcgctccctgcagaacctcaccaagagaagcgaggac
aaagggaacttcaccgggggccgacgctggtcctttgacaagacgaagaaagaggaaaag
gaggacgataaggaagctcaggcgtcgtctccatcgaatcagcaagctcaggcagagacg
ccctccacctcctctgcctctgtttctcccgacaaagggaggaagctaagaaagacgcta
ttctctggagggaggagtgattctctcccagctaagtctgatatgaaccaggctggttcg
acatctgaggggaggctcagaggctggtttggctccggtgaatcccagaacaagccaagg
ctggaagtttctcctaaggtagaaagcagctcagacgtaccccctcccctccctcctcgc
ctataccctcagtgctcctctccctccgcccccccctccggtcatacctcacctgatgac
tgcaatcacaccaatcccttctcccccgcctcaccccccatctcctcctctaaccctttc
ccctcacagcgcaacccttttttcgaggatctcatagccgaggagtcacagaggtcccct
acttttgcaccttgcacctcatccaactcctccccctttcattacaccaccctgccctgc
acacccagccctgctcgggatgttacagctacaaatatggctcacatgaaacgggagcgc
cccaggccagttgcgaggcagatatctctccctgcaataatacccaaagcagccaaaaca
aaaccctccgcccctcgctccatgtctgagtgtacaggagaatgggacgactctttcgat
gcctttgcctccagcaggctctactcacctcaagggagtgttcctcagaagcagagaacc
agtcaaccatctcccagtgatcttccaggtaataacaacactcatgcacacgagctgcaa
acatgtgaagaggagcctccacctttgcctccaaggagacctgtaagaacttcagtgaat
gagatttactctgatggctggttgcacagaggacaagaactagctgtccataaagaagcc
tacctgctgtctcagaccggcgtggcctcgctgcagcggggaagagaagcagaaagcaag
aggaacagtatctctccggaccctcacaccattagcgagacctcagactcgctcagcgct
aactctcagacgtacgcaaatatcactccaccaggattcacgacagatgaaaagctcaaa
aggttcaaatatgaacctttggaagatgaaaaccaccgctggggagggatgttgttcgag
caagacttgtatggacgcatgtgcagaggaaactacggaccacccaaaatgaatcgttta
tcgttgaaggctgaagagattgccggaaataatgtgacatccgtgaactcaggacctaaa
atacttgatagtgaggtatctgtagcagaccttttaaacatatcatgttcttcctcaaaa
ccagatgcaaaagcactagagattacaacagctcgagtagcagagccagagtctaatcca
cttgagagcacatgcatcaacaataatgtgtctttgtccccaaccttggaagatctgaac
atgaatgtgaataattctgattttggctttatcgattcagatagctcttcgcattcagag
gtagttgacccactcaaaggcattaggagttttggcgggacttttccacaaccgccagaa
gcttcgcagatagctgcctaccatgtggagacagtcaccacacctgaggaactgttcact
ttgaaggacacctacatacgggagagaaactcttcctttgaaatacctgcatcatccagc
aaactgttcaaagtccctccagtttaccaagacaattgccatgatcagctgaataactcc
agggtaagcagcagagaaatgactgcgagaaatgcagacaatattaaaactgagtccaga
ggtgttactgcaagaagtgttgcagatttaaaaaagacacaaaaggagtttgatgataac
ggaaacccagaagctaaaacagctgcacttaaccaacatgatgcatttcctggtgtggtt
agtgcacgcttgagaccaaaaggactgtctcgacaaaacagcagcggcagcccaagcaac
cagagccaaaacggagacagagagttcgaacagttcttgtccctcgttcaaaacatttcc
gaagtcagagaaggaccgtcgtcatatctgccctctaaatcagctctttcttcattactg
tcattagtagatagcactacaaatcaaaatgagtccaatgaaacatcacagatatcttca
caagacaacacaatagtaaaatcctctgatatcagctttgaagaccttcatgctaaagta
gcaccaaactcaagaacccccactaagtcaaagattggggaatctttgctcgaaccctct
ttctcctccatcccgcgcacactctccctttcaggtgacgcacaggctaagccccaccct
acccttttttgttgcccctccatacatccctcaagcatggggcccggtgctggagccagc
agtactctggcagtggccccctacacctccaccacctgcaacactgaccagcccctggtc
gatgcacgccactcactttttcctgaggagactcagcctgctagcagcctgccccgtcag
gagagcagaactcatccagtgaaaccgttaacttccagccaatcagagaagaaggagggc
cggtcggtcctggagaagctgaagtccaccatccaccccggacgccacgcccaccaggct
gctgccgaacctgagaggagtcaggaggtgagagtggacaacacggcccactaccagcag
ctgaccaacatggagctgatctccctgctgctgcagcaggagatggacatgcagaagcag
gacgcggcctccgagcagcaggcggcacagctgcacaagtgtgaggctgatctgaaaaag
gtcaagctacaggttcgagacctggaggactacattgataatcttttactgcgcatcatg
gagcagacccccacgctgcttcaagtcaaaagacacaagtga
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integrated database retrieval system
