Notothenia coriiceps (black rockcod): 104957013
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Entry
104957013 CDS
T04920
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03015
mRNA surveillance pathway
ncc04261
Adrenergic signaling in cardiomyocytes
ncc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104957013
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104957013
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104957013
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncc01009
]
104957013
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104957013
03036 Chromosome and associated proteins [BR:
ncc03036
]
104957013
Protein phosphatases and associated proteins [BR:
ncc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104957013
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104957013
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104957013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
104957013
NCBI-ProteinID:
XP_010782911
UniProt:
A0A6I9P9V4
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MGEDAESPKINHTFLRDYVTEADVISTVEFNQTGDLLATGDKGGRVVIFQRETDSKGESE
EVGETGDSGEYNVYSTFQSHEPDFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKVSERDKRPEGYNLKDEEGRLKDISTITSLQVPVLRPADLMVEVRPRRVFSNGHTYHV
NSISVNSDGETYLSADDLRINMWNLGITDRSFNIVDIKPANMEDLTEVITAAEFHPHHCH
LFVYSSSKGTLRLCDMRSSALCDRHTKLFEEPEDPGSRSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMDKGPVETYQVHEYLRSKLCSLYENDCIFDKFECVWNSSDTVIMTG
AYNSFFRMFDRETGRGVTLEAWRESSKPRAVLRTRRVYSGGKRRRGDVGVDSLDFTKKIL
HMAWHPSENIIAIAATNNLYIFQDRVNPETQLQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggacgctgagagccccaaaatcaaccacaccttcctgcgagactacgtcaca
gaagctgatgtcatctctacagtggagttcaaccagacaggggacctgctggccactggg
gataaaggtggccgagtggtcatctttcagagagagacagattctaaaggggagtccgag
gaggtgggggagacaggggactctggggaatacaatgtctacagcacgttccagagccac
gagccagactttgactacctgaagagtctggagattgaagagaaaatcaacaagataaga
tggctgccacagcagaatgcagcacatttcctcctctccaccaatgataagaccattaaa
ctgtggaaggtgagtgagagagacaagagaccagagggatacaatctgaaagatgaggag
ggacggctcaaggacatctccaccatcacctctctgcaggtgccggtgctgagacccgca
gatctgatggtggaggttcgtcccagacgtgtgttctcaaacggacatacataccatgtc
aactccatctcagtcaacagcgacggggagacctacctgtctgctgatgacctccgcatc
aatatgtggaacctgggcatcacggaccgcagtttcaatattgttgacatcaaaccagcc
aacatggaggatctgacggaggtgataacggcagcggagttccacccccaccactgccac
ctgtttgtgtacagcagcagcaaggggaccctgcgcctctgtgacatgagatcttccgct
ctctgtgacagacacaccaaactgttcgaggaacctgaggatccagggagccggtccttc
ttctctgagattatttcctctgtgtcggacgtcaagttcagccacagtggacgttacctg
ctgaccagagactacctcaccgccaaggtgtgggacctgaacatggacaaggggcctgtg
gagacgtaccaggtccatgaatacctgaggagcaagctgtgttccctctatgaaaacgac
tgcatcttcgacaagtttgagtgtgtttggaacagctcagacaccgtgatcatgacaggg
gcgtacaacagcttcttccggatgtttgacagggagacggggcgaggcgtaaccctggag
gcttggcgagaaagtagcaaacctcgggcagtgctgcggaccagacgtgtgtatagcggt
ggtaagcgtcgccgcggagatgtcggcgttgatagcctggactttaccaagaaaatcctg
cacatggcttggcacccatccgagaacatcattgccatagcagccaccaataacctgtac
atcttccaggaccgtgtcaaccctgagacgcagttacagtga
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