Notothenia coriiceps (black rockcod): 104957088
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Entry
104957088 CDS
T04920
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04144
Endocytosis
ncc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104957088
09144 Cellular community - eukaryotes
04530 Tight junction
104957088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104957088
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
104957088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
104957088
NCBI-ProteinID:
XP_010783003
UniProt:
A0A6I9P7Z2
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MNRSFNKSQPLRNAECNAVEVKSKYGAEFRRFSVDRIKPGKFEEFYKLILHIHRIANMEV
MIGYADIHGDLLPINNDDNFCKAVSTAHPLLRIFIQRQEEIDYASYGSNTLTRRKKPVVA
LRNNDINRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVTGKSLDQVTDMMIAN
SHNLIVTVKPVNQRNNVVRSSRISGSSGQSSDSSGSTGYPSLSVASVGMISSGAHGYQDD
LESDEDTDIVIENSIKRPSQRSNASLASSVSRTHQQTPTTASGQAAPPSPPTRPSSVVST
ASFHSQPSLNGGSQHHHHHLHHQGSLSYQLHRDLSLHHNPHQQAQLRHHQIQPVHHSSNP
ALRHSNGSLHKILSSLKTDPRHSLALPRGGVEEDGTVITL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagctttaataagtcgcaacctctgcggaatgcggagtgtaacgcagtagaa
gtgaaaagcaagtatggggcagaatttcgccggttttcggtggaccggatcaagcctggc
aagttcgaagagttttacaagctcatcctgcacattcaccgcatcgccaatatggaggtg
atgatcggctatgctgacatccacggtgatttgctgcccatcaacaacgacgacaacttc
tgcaaggcggtgtcaacggctcatccactgctcaggatcttcatacagagacaagaagag
atcgactatgccagctatggttccaacactttaacccgtaggaagaaaccagtggttgca
ctgcgcaacaatgacatcaaccgcaagcgaccacacatccgcatcggcatgccgcaggac
ttccggcccgtctcctccatcattgatgtggacatcctacctgagtctcaccggcgtgtc
cgactgtatcgccacggctcggacaaacccctgggcttttacatcagagatggaaccagc
gtccgggtgacaccccacgggctggagaaagtccccggcatcttcatatctcggctggtg
cctggagggttagcggagagcaccgggctgctggcggtcaatgacgaggtgctggaggtg
aatggcattgaagtgacgggaaagtccttggatcaggtaacggatatgatgatcgccaac
agccacaacctgatcgttacggtcaagccagtgaaccagcggaataatgtggtccgcagc
agcaggatctcagggagttcaggccagtcgtcagacagcagcgggtcgaccggttacccg
agtttgtcagtggcctcagtggggatgatctcctctggagcacatgggtaccaggacgac
ctggagagtgacgaagatacggatattgtcattgagaacagcatcaagcggccgtctcaa
aggtccaatgcttcgctggcgtccagtgtgtctcgcacacatcagcagacaccaacgaca
gcttcgggccaagcggcacctccgagcccccccacacgtccttcatcggtggtctcaacc
gcctccttccactcacaaccgagcctcaatggggggtcgcagcaccaccaccatcacctc
caccaccagggcagcctcagctaccaactccacagagacctgagccttcaccacaacccg
caccaacaggcccagctccgtcaccaccaaatacagcctgtgcatcacagcagcaaccca
gccctccgccatagcaacggcagcctgcacaaaatcctcagctccctgaaaacggaccca
cgacacagtctcgcgctgcccaggggcggagttgaggaggacggcaccgtcattacccta
taa
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