Notothenia coriiceps (black rockcod): 104957145
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Entry
104957145 CDS
T04920
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncc03009
]
104957145
Enzymes [BR:
ncc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
104957145
Ribosome biogenesis [BR:
ncc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104957145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
104957145
NCBI-ProteinID:
XP_010783059
UniProt:
A0A6I9NYD8
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MSRNALINRGVNLDPLGKWSKVGLVIYDSSVPVGATPEYLSGQYMLQGASSFLPVMALSP
QEGELVLDMSSAPGGKTTYIAQLMRNTGTIVANDANADRLKSVVGNIHRLGVTNTVVCNY
DGRQFPKVMGGFDRVLLDAPCSGTGVIAKDPAVKTSKDEGDIQRSAHLQKELLLSAIDSV
NAESSTGGYVIYCTCSIMVEENEWVVDYALKKRNVKLVPCGLDFGKEGFTRFKERRFHPT
LKLSRRFYPHTHNMDGFFVAKFKKFSNVVPTTPVVKEEEENGEAPEATVVTESPEKKSAK
SDKKKKVVPGKAVGLKGKPLTNGTAAKKKTIVPGKAGGLKGKPQTNGTAAKARQAIAKPK
GKKDSPAGPAKAKKAKMDGETVKGAMAKKPAAKTADESKASKADKQKKSPMKEKKRMGKN
KFRKLQSLLKNEIE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaatgccctgatcaacagaggagtgaaccttgaccctttgggcaaatggtct
aaagtgggtttggtcatctacgactcctcagtacccgtcggtgcgaccccggagtatctg
tccggtcagtacatgctgcaaggagcctccagcttcctgcctgtcatggcgctctctcct
caggagggggagttagtgctggacatgagctcagccccaggagggaagaccacttatatc
gctcagctgatgagaaacacggggacgatcgtggcgaatgacgccaacgctgacagactg
aagagtgtggtggggaacatccaccgtctgggcgtcaccaacacggtggtctgcaactac
gatgggaggcagttcccaaaggtgatgggtggatttgaccgagtgctgctcgatgctccg
tgctcaggcaccggagtcatcgctaaagatccggctgtgaagaccagcaaggatgaaggt
gacatccagcgctctgcccacctacagaaggaactgcttctgtccgccatcgactccgtc
aacgctgagtcctctacgggaggatatgtaatctactgcacttgctccattatggtggag
gagaatgaatgggtggtggactacgctttaaagaaaaggaatgtcaaattagttccctgc
ggacttgactttggcaaggaaggcttcaccaggtttaaggaacgtagattccatccaact
ctgaaactgtctcgccgattttaccctcatacccacaacatggatgggttttttgtggca
aagtttaagaaattctccaacgtagttccaactacaccagtagtaaaagaagaagaggaa
aatggagaggctcctgaggcgacagtggttacagaatcccctgaaaagaaatccgccaaa
agtgacaagaaaaagaaggtcgtccccggaaaggcagtcggcttgaagggaaaaccccta
accaacgggacagcggccaagaaaaagacgatcgtccccggaaaggcaggcggcttgaag
ggaaaaccccaaaccaacgggacagcagccaaggcaaggcaggcaatcgccaagccaaaa
ggcaaaaaggactcacctgcgggaccagcaaaggcaaagaaagccaagatggatggagag
actgtgaaaggggccatggccaagaaacctgcagcgaaaacagctgatgaatcgaaagca
tcaaaggctgacaaacagaagaaatcacccatgaaggagaagaaaaggatgggaaagaat
aaattcagaaagctacagagcctgttgaaaaatgaaatagagtga
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