Notothenia coriiceps (black rockcod): 104957280
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Entry
104957280 CDS
T04920
Name
(RefSeq) nucleolar and coiled-body phosphoprotein 1-like isoform X1
KO
K25818
nucleolar and coiled-body phosphoprotein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncc03021
]
104957280
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Others
104957280
BRITE hierarchy
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GFIT
Motif
Pfam:
SRP40_C
Motif
Other DBs
NCBI-GeneID:
104957280
NCBI-ProteinID:
XP_010783199
UniProt:
A0A6I9NYQ9
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Position
Unknown
AA seq
1167 aa
AA seq
DB search
MAEQKSKPSDLYKCVYSFLAENMLTKAAQEFMKETKVTPQDENDESLIGIYDFWVKSPEA
KKRKAPSSKAESKTSPSAKKAKTSAASSSSEDSSSSSSDDEAAVAKPTKAAPAAAKVVPA
KAPAAAATKAASSSSEDSSDSEEEKAPAKAPAKAPAKAPVKAPAAPAAGRKKDSSSSSEE
SDSEVEQPAKAPAKAKGVTVTAAKPAAPAKAAAQKKKDSSSEDSSSDSEDDKPTKAPAKP
APAKAAPVKAAAAESSSEDSSSEDEAPPSKKPKAGAYSAVPPPASVQKAPASVTKSPAAP
AASKAKDSSSSSSSDEEEEKKVAAKPAPVKTPAAKPASKESSSDSSSDEEEAKKPAVKVT
PAKAAPVKAAPAKDSDSSSSEEEEEAKKPAAKVTPAKAAPAKPVAAKVTPAKKDSSSEDD
SSSEEEEEAKKPAAKAIPAKKPAAKPAPAKTPPAKKEESSSDSSSEDEAPAKPAAKAAAK
PKPAAVASKAPPKAAESSSDSDDSSEDEKTVKAKPATPAAKPAAKPATAAESSSDSDSSS
DEEPAKAKPAKAKLATPASKPAAAAESSSDSSSEEEPAKAKLAKAKPATPASKPAAESSS
DSSSEDEEPAKAKPAAAKPAAKPATPAAKPAVAAESSSESSSEDEEPAKAKPAAAKPATP
ASKPATPAAESSSDSSSEDEEPAKPATPAKAKPATPVAKLAAAAESSSDSSSEDEEPAKA
KPATPAKAKPATPSKAKPATPVAKLAAAAESSSESSSEDEEPAKPATPAKAKPATPAKAK
PATPAKAKPATPAKAKPATPVAKLAAAAESSSESSSEDEEPAKAKPAAKPATPASKPATP
AAKAAAAESSSESSSEDEEPAKAKPATSAKAKPTTPAAKPTAAAESSSDSDSDSEDEAAK
PAVKKPTPAAAAPASTPKASKKKAESSSDSSDSETETKTTPAKPPVTNGKAATPKAATPK
AATPKAATPKAATPKTPAKPAESSSSDSSSEEEEEASKSSVKPATPAATPKTIPAAKAKE
SSSSDSSSEEDAPRRAATAPTTPTTNGNRKKGEESSESDEEETEVTTPKNKMATTTPQTF
PKANKKSSNVPFRRIREEEVAVDPRLQDNSFDAKFGSNGDWGQKANDTLRFTKGKSFRHE
KTKKKRGSYRGGAINSTSVNSIKFDSE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaaaagtcgaagccgagcgatctttacaaatgcgtatattcctttctggcg
gagaacatgttaaccaaggcggctcaggagtttatgaaagagactaaagtgactccacaa
gatgaaaatgatgagagcctcatcggcatctacgacttctgggtgaagtctcctgaagcc
aagaaacgaaaggcgccctccagcaaagctgaatctaaaacaagtccatcagccaagaag
gcaaaaaccagtgcagcgagctccagcagtgaagactcaagcagcagcagcagcgacgat
gaagcagcggttgcaaaaccaaccaaggcagcccctgcagcagctaaggtggtgcctgct
aaagcaccagcagcagcagctactaaagcggcatccagcagcagtgaagactccagtgac
tctgaggaggagaaggcccctgcaaaggccccagccaaggctcctgcaaaggctcctgtg
aaggcgcctgctgcccctgctgcaggaaggaagaaagacagcagctccagcagtgaagaa
tctgactctgaggttgagcagcctgctaaagccccagctaaagccaagggtgttacagtc
acagcagccaaaccagctgctcctgctaaagctgcagctcagaaaaaaaaggatagcagc
agcgaagacagttcatcagattcagaagatgataaaccaaccaaggctccagctaaaccg
gctccagccaaagcggcccctgtgaaagcagctgctgctgaatcaagcagtgaagactct
tcatctgaagatgaggctccacccagcaagaaacccaaagcaggagcgtacagtgcagtc
ccaccgccagcttcagtccagaaagctcccgcttcagtgaccaagtctccagctgcacca
gcagccagcaaggccaaggacagctcctcaagcagcagcagtgacgaggaagaagagaag
aaagtagctgcaaagcctgcaccggtaaagacccccgctgcaaaaccagcgtcgaaggag
tccagctcagattcaagctcagatgaagaggaggcaaaaaagcctgctgtgaaagtcacc
ccagctaaagctgccccagtcaaggctgctcccgctaaagactcagactcatccagttca
gaggaagaagaggaggccaaaaaacctgcagcaaaggtgactcctgcaaaggctgctcca
gctaaacctgttgcagctaaagtcacgcctgctaaaaaagactccagttcagaggacgat
tccagttcagaggaggaagaggaggccaaaaaacctgcagcaaaggcgattcctgcaaag
aagccagcagctaaacctgcaccagccaagactcccccagctaaaaaagaggagtccagt
tcagacagcagctctgaagatgaggctccagccaaacctgctgctaaagctgcagccaaa
ccaaaacctgctgctgtagcttccaaagccccccccaaggcagctgagagcagctctgat
tcagatgactcctctgaggatgaaaaaacagtgaaagctaagcctgctaccccggctgca
aagcctgctgcaaagcctgctactgctgcagagagcagctcagactcagactcctcctct
gatgaagagccagctaaagctaagccagctaaagctaagctagctaccccagcttcaaag
cctgctgctgctgcagagagcagctcagactcctcctctgaggaagagccagctaaagct
aagctagctaaagctaagccagctaccccagcttcaaagcctgcagcagagagcagctct
gactcttcttctgaagatgaagaaccagccaaggctaaacctgcagcagctaaaccagct
gcaaagcctgctacgcctgcagcaaagccggctgttgcagcagagagcagctctgagtct
tcttctgaagatgaagaaccagctaaggctaaacctgcagcggctaagcctgctacaccc
gcctcaaagcctgctacccctgcagcagagagcagctccgactcttcttctgaagatgaa
gagcccgctaagccagctacaccagctaaggctaaaccagccacgcctgtagcaaagcta
gctgctgcagcggaaagcagctctgactcttcttctgaagatgaagagccagctaaggct
aaaccagctacaccagctaaggctaaaccagctacaccatctaaggctaaaccagccacg
cctgtagcaaagctagctgctgctgcggaaagcagctctgagtcttcttctgaagatgaa
gagcccgctaagccggctacaccagctaaggctaagccggctacaccagctaaggctaag
ccggctacaccagctaaggctaagccggccacgcctgctaaggctaagccggccacgcct
gtagcaaagctagctgctgctgcagaaagcagctctgagtcttcttctgaagatgaagaa
ccagctaaggctaaaccagccgcaaagccagctacccctgcttcaaagcctgctaccccc
gcagcaaaggcagctgcagcagagagcagctctgagtcttcttctgaagatgaagagccc
gctaaggctaagccagctacatcagctaaggctaaaccaactacccccgctgcaaagcca
acggcagcagcagagagcagctctgactccgacagtgactctgaggatgaagcagccaaa
cctgcagtcaagaaaccaactcctgcagcagcagcccctgctagtacgcccaaagcttca
aaaaagaaggctgagagcagctccgacagctccgattcagagactgagacaaagaccacc
cctgccaagcctccagtcaccaatggcaaggcagctacacccaaggcagctacacccaag
gcagctacacccaaggcagctacacccaaggcagctacacccaagactccagcaaagcct
gcagagtcatcgtccagtgacagcagctccgaagaggaagaagaggccagtaaaagttct
gtaaaacctgctacacctgcagcaacacccaagacgatcccggctgctaaagctaaagag
agcagctcctcagacagttcatcagaggaggatgcaccacgcagagcagccactgcaccc
accacccccacaacaaatggaaacagaaaaaaaggtgaagagtcatcggagagcgacgag
gaagagacggaagtgactacaccaaaaaacaagatggcaacaaccacacctcagacgttt
cctaaagccaataagaagtcgtccaatgtacccttccgtagaataagagaggaagaagta
gcggtggatccccgtctccaagacaattcttttgatgcaaagttcggatcaaacggggac
tggggccagaaagccaacgacacgctcaggttcacaaagggcaagtcattccgccatgaa
aagacaaagaagaagagggggagctaccgcggcggagccatcaactccacctccgtcaac
tctattaagtttgacagtgaataa
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