Notothenia coriiceps (black rockcod): 104957315
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Entry
104957315 CDS
T04920
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncc03016
]
104957315 (trub1)
Enzymes [BR:
ncc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104957315 (trub1)
Transfer RNA biogenesis [BR:
ncc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104957315 (trub1)
Prokaryotic type
104957315 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
GAIN_A
Pus10_C
Motif
Other DBs
NCBI-GeneID:
104957315
NCBI-ProteinID:
XP_010783239
UniProt:
A0A6I9NYU6
LinkDB
All DBs
Position
Unknown
AA seq
120 aa
AA seq
DB search
IHFCHPSYSALKKDGQRLSVLLKKGHKVEAKPARAVTVYNLTLQEFTAPLFTLDIECGGG
FYVRSLVDDLGKALSSCAHVKELTRTKQGQFTLEEHALQEEQWSLEHILRALQPCPEALS
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atacatttctgtcatcccagctactctgcactgaagaaggacggccagcgcctgtctgtc
ctgctgaagaagggccacaaggtggaggccaaaccagcgcgggctgtcaccgtgtacaac
ctgaccctgcaggagttcaccgccccgctcttcaccctagatattgagtgcggtggtgga
ttttatgtcagaagtttggtagatgacctgggaaaagctctgtcgtcatgtgctcatgtg
aaggagctaacccggaccaagcagggccagttcaccctggaggagcacgccctgcaggag
gagcagtggagcctggagcacatcctgagggccctgcagccctgccccgaggccctcagc
tga
DBGET
integrated database retrieval system
