Notothenia coriiceps (black rockcod): 104957383
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Entry
104957383 CDS
T04920
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104957383
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
104957383
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Paralog
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Ion_trans
DALR_1
Motif
Other DBs
NCBI-GeneID:
104957383
NCBI-ProteinID:
XP_010783311
UniProt:
A0A6I9PB69
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MRHRYAGAVHQHQIPDEKQQSSKPSPDPLAPVFNLPPPPSSHHRDRTSTTAVHRQSLQEL
PCLSQPSRRPVHSGDPLPLTSYDTAQRPSHRTIEPSTGQPAHLQQDPWAPAGSQQQQPPP
PQSEKQPVSPSCHCSFSEQEASLSQNHHHPADPLPPQPSPPFPPPKLPPPPTSSSSSFSR
ESKRGDRIQRSANNYQQASIVDRCRGGGGAGGHRDHRQLLQQQQQQQQQQQQQQQQQQQQ
QQQYQQHSHLRLQQRDPSPEGSRANSQKGRSLNVCESTEANKRAFESQTPDLQQQQIPQL
RAQQQLLVGSSLPINYCASGSGELCRTQPAPLLQQQEQQRQQGALGLCPQRPQHCEQDRN
KSGRITAPGDQAQPHSRDSRATPPVTQQAYAGNSSATGSNSSKDSPNYGSSYHLWPESPH
KGEERIRIDLHKATTEQKKLSHGGSKPSLSESSGRLPQIAMNTCKYNGGVVRPLVGSLAS
SSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGGEDPSKASNESLVREGSVRAGGRATQK
KNRDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALKC
LISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCAIHPIPGH
YVFTWKARLAFTYTPSEADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALN
KINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLI
SITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMD
TQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQ
RKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDSVTGSLQALPCLIS
QAITQQQQEFLDGFVHRFRPASLASERSERSERSERSWTSTARRRRSPSTAPHTSSDSG
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtacgcgggagctgtccatcagcaccaaatccccgacgaaaagcaacaa
agcagcaagccgagcccagacccactcgctcctgttttcaacctgccgcccccgccctct
tctcaccaccgagatcgtacttcgaccaccgccgttcatcgccagagcctccaggagctc
ccctgtctgagccagccctcccggagacctgtgcacagcggcgaccctctacctctgacg
agctacgacaccgcccagcgaccttcacaccgaaccattgaacccagcaccgggcagccg
gcgcacctgcagcaggatccctgggccccggccggctctcagcagcagcagccgccgccg
ccgcagtccgagaagcagcctgtttcccccagctgccactgcagtttttccgagcaggag
gcgagcctttctcaaaatcatcaccatccagccgatcctctcccaccgcagccctcccca
ccttttccgccgcctaaactaccaccgccaccaacgtcgtcatcctcctccttttcccgg
gaatctaaaaggggggatcgtatccaaaggagtgccaataattaccaacaggcaagcatc
gtggaccgctgcaggggaggaggaggagcaggagggcaccgagaccacagacagttgttg
cagcaacagcagcagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcag
cagcaacagtatcaacagcacagtcatttaagactccaacagagggacccctcccctgaa
ggaagccgtgcaaactcgcagaaagggcgctctttaaatgtatgtgagtcaaccgaggct
aacaagagagcattcgagtctcagactccggacctgcagcagcaacagatcccacaatta
cgagcgcagcaacagctactggtggggagcagcttgcctatcaactactgcgccagcggc
tcaggagagctatgtaggactcaaccggctccactgctgcaacagcaagagcagcagcgg
cagcaaggcgcactggggctctgtccccagcgtccgcagcactgtgaacaagaccgcaat
aagtctgggaggatcaccgcgccaggcgaccaggcgcagcctcactcccgcgactcccgc
gccacccccccggtaacgcaacaggcgtacgcggggaactcgtctgcgactggcagcaac
agcagcaaagacagccccaactacggctcgagctatcacctgtggcccgagagcccgcat
aaaggagaggagcggatccgcatcgacctccataaggccactactgagcagaagaagctg
agccatggtggatccaagccctccctctccgagagcagcggccgactccctcagatagcc
atgaacacctgcaagtacaatggcggagtggtgagaccactagtgggcagcctggcgtcc
tcgtcgcgccgcaaccttgcggagctcgactcggagacgcagcccttgcagacactgcac
agctctggcctggaggtggtggtgtccaagggcaacggcggcgaagaccccagcaaggcg
tccaacgagagcctggtcagggagggcagtgtgcgtgccggaggcagggcaacacagaag
aagaacagggacatcggatacaggctcggccaccggagggccctgtttgagaagcggaag
cggctcagcgactacgcactcatcttcgggatgtttgggattgtcgtcatggtgacggag
acggagctgtcatggggggtttacactaaggaatcttcatactcatttgcactgaaatgc
cttatcagcctttccactgttatattgcttggtcttataataatgtaccatgcccgggaa
atccagctgtttatggtcgacaatggtgcggacgattggaggatagccatgacgtatgag
cggatcttcttcatcgtgctggagctgctggtgtgtgccatccatcccatcccgggacat
tacgtcttcacctggaaggcgcggctggccttcacctacacgccgtcggaggccgatgct
gacgtggacatcatcctctccatccccatgttcctgagactctacctgataggcagggtc
atgttgctccacagcaaactgttcacggacgcttcgtctcgcagcatcggcgctctcaac
aagatcaacttcaacacacgcttcgtcatgaagaccctcatgaccatctgtccgggaact
gttctgctggtgttcagtatatcctcctggatcattgcggcatggactgtgcgcgtctgt
gagaggtatcatgacaaacaggaagtgaccagtaacttcctgggagccatgtggcttatc
tcgattaccttcctctccatcggctacggtgacatggtaccacacacgtactgtgggaaa
ggcgtgtgtctgcttacagggattatgggagctggttgcactgcactggtggttgccgtg
gtagccaggaagctggagctgaccaaggctgagaaacacgtccacaacttcatgatggac
acacaactctgcaaacgagtaaagaacacagctgccaatgtactcagggaaacatggctc
atctacaaacacactaagttggtcaagaagatagatcatgccaaggtgcggaaacaccag
cgcaagtttctccaagccattcaccaagctcagaaactgcgcagtgtgaagatggagcaa
cggaaactcaatgatcaggccaacaccttggtggacctcgcaaagacccagaatgtgatg
tatgacctggtgtcagagctgcaggagcgcagtgaggagctggacaagcgcatcggcacg
ttggaggacaagttggactcggtgacgggcagcctgcaggctctgccctgcctcatctcc
caagccataacccagcagcagcaggaattcctggacggctttgttcaccgctttcggccc
gcctcactagcctcggagcgctctgaacgctctgagcgctctgagcggtcgtggacttcc
accgcccgcaggcggcgctctccctccacagcaccacacacatcctctgatagcggataa
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