Notothenia coriiceps (black rockcod): 104957431
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Entry
104957431 CDS
T04920
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04020
Calcium signaling pathway
ncc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104957431
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104957431
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104957431
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Glutamate (ionotropic)
104957431
BRITE hierarchy
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GFIT
Motif
Pfam:
NMDAR2_C
SBP_bac_3
Lig_chan
Motif
Other DBs
NCBI-GeneID:
104957431
NCBI-ProteinID:
XP_010783363
UniProt:
A0A6I9P923
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All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MHSHMVKYNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTG
YGIALQKDSRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGV
FYMLLVAMGLSLLVFSWEHLLYWKLRHSVRESERLDFLLAISRGIYSCFSGVEHTDHNGS
LQTPDVTTNYTQANMLKMLKTAKDMVSSARVENSLDNATKTIEHWSRRGGDNVRVGLPPR
VTTTDMAHCRLPYISSISDNHSQYPQRALTPTFPIHYGDSSTQPLLEKPRVVTRPTPLRY
TLPSRNSQHVLERTLPISSLSSPHIAIRDPVTPGTSNPHHSSRLYVENPARHPPSPFVPY
REFQVPNIYVDRGPLRRKFSYPPDCVSRKRRTHSYVFDAADPRARADYDEPRSCLAELRA
NHLLNNHAPVGAASGCTAGHYPGTSTSCNSCMKSYLEPEMEDVPLLGKDKLNRRASFLKA
TWGNDRIHQVDETKPSTSASSARVDMPDLFPRVVVANPKPHKLYGSLGHNLSCYPLAAEP
AYLDPAHMGSYPYKQKLKYCESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTD
LPVYVGPLAQGPPQFYGSSKDMCHLFPCTSHCPDNAAMMPRMSDRQVVYHNNMFGPYDGS
GKRETPGSGSRERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcactcccacatggtcaaatacaaccagaagggagtagaggatgccctgaacagcctc
aaaacagggaaactggatgcctttatctacgatgctgctgtgctgaattacatggctggc
aaagatgagggttgcaagctggtgaccattggcagtgggaaagtgtttgccaccactggt
tatggcatcgccctgcagaaggactcacgctggaaacgaccaattgatctggccctgctc
cagttcctggctgatggcgacactcagaagctgcagaccgtctggctcacaggcatctgc
cgtaatgagaagaaagaggtgatgagcagcaagctggacattgacaacatggcgggggtc
ttctacatgctgcttgtggccatgggcctgagcctgctggttttctcctgggaacatctg
ctctactggaaactacgacattcagtccgcgaatcagagcgcctggacttccttttagct
atcagcagaggcatctacagctgcttcagtggagtagagcacactgaccacaatgggagc
ttgcagactccggacgtcactaccaactatacacaagccaatatgctaaaaatgctgaag
acagccaaggacatggtgtcctctgccagagtggagaactctctagacaatgccaccaaa
acaatagagcactggagcaggcgggggggcgacaatgttcgggttggcctgccacctaga
gttacaaccacagacatggctcattgtcgtctgccgtatatctccagcatctcagacaac
cactcacaataccctcagagagccctcacacccacgtttccaattcattatggggactcc
tccacccagccactcctggagaagcccagagtggtgacccgacccaccccgctgcgatat
acgcttcccagccgcaacagtcagcatgtcttagagaggactctgcccatctccagcctc
agcagtcctcacatcgccattcgggaccctgttacccctggtacttctaacccccaccac
agcagcaggctgtatgtggaaaacccggcccggcaccccccgtcaccttttgttccttac
agagagttccaggtgcccaatatctacgtagatagaggaccactgaggaggaagttcagc
tacccccctgactgtgtgagccggaagaggcggacccatagctatgtgtttgatgctgca
gatcccagagccagagctgactacgatgaacctcggtcctgccttgctgagttgagggcc
aatcacctccttaacaaccatgcccctgtgggtgctgccagtggctgcactgcgggacat
tatccaggcaccagcacaagttgcaactcctgtatgaagtcctatctggagcctgaaatg
gaagacgtaccactcctggggaaggacaaactcaaccgtcgggcctcattcctcaaagca
acatggggcaacgacaggatccatcaggtagatgaaacaaagccctcaacatctgcttcc
tccgcccgtgtagacatgcctgacctttttcctcgggtggtagtggccaacccaaagccc
cacaagctatatggcagtctggggcacaacttgtcctgctaccccttggctgctgagcct
gcttacttggacccggcacacatgggatcctacccctacaagcagaagctcaagtactgt
gagtccacccggctgccctcttacagggaagccatcctgcagaatgccgctgccctgcgc
cgctcctcctccacagtggtgcacagacactactccacctacctgaactcgtacacagac
ttaccggtgtatgtagggccacttgcccagggaccgccccagttctatggcagttccaag
gacatgtgtcacttgtttccctgtacaagtcactgcccggataacgcagcaatgatgcct
cgtatgagcgacaggcaggtggtttaccacaacaatatgtttgggccctacgatggttca
gggaagagggaaaccccaggctctgggagcagagagcggaggcaggtgttggtggcgcgc
agagtcaacagtccctatgtgccaaagccctggggcagggtatccagcctggagtctgag
gtctga
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