Notothenia coriiceps (black rockcod): 104957540
Help
Entry
104957540 CDS
T04920
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104957540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104957540
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Serotonin (5-HT3)
104957540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Tetraspanin
MamF_MmsF
YhhN
Motif
Other DBs
NCBI-GeneID:
104957540
NCBI-ProteinID:
XP_010783487
UniProt:
A0A6I9P5M8
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MTHVAFLLLIVFTGGSFSEKVCSYHDVVDYLNLTTNSGVYKLTRPVLNYKHPTVVQLDII
LYAILAVIEKTQTFIPFVWATMTWNNERIKWDPDQFCGINSISVPREMLWMPDLFIYEMI
QKDDSPLNPYMYVLNDGTVTCEEDLRVVSTCRMDVHKFPFDTQKCTISIGSAIHCVDELR
IFPFSNASRATQFSREVMKSQGEWEFLDLSISSNNFTFGIKQWEQLIYTFTMKRRPLLHV
INFLLPILFFLSLDIASFFIADHRGEKLGFKVTVLLAISVLLLILNDILPSMSNKTPLIA
TYCIVIFAMMLLSLLETILVTYLMEKDSASYEKLRLKNNLEEQQEKVNNCNTEEKRENCC
PCICKVSDSEKQHELLPVAEVVNNSIQWRESHVLLLILEELKELQHTLNLHLNCRHQPCC
HQTSAHLSPPPRHSLPNCINESAAVSGDAPRCSHHSHKGNRFVDAMMLTGFIFLLFLTDG
VLPENNCSYQDVLNHLQLTKTNELYSMTRPVKNYKRPTQVSLEVLLYAILDV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgttgcttttctcctcctgatcgtcttcacaggcgggtcgttctctgagaaa
gtgtgcagttaccatgatgtagtggactacctgaacctcaccaccaatagcggcgtgtat
aaactgacccggcccgtgctgaactacaaacacccaaccgtggtgcagctggacatcatc
ctctacgccatcctggctgtgattgagaagacacaaacttttattcctttcgtctgggca
acaatgacgtggaacaatgaacgcatcaaatgggaccccgatcagttttgtggaataaat
tcgatttcagttccaagagaaatgctctggatgccagacctgttcatctatgagatgata
cagaaggatgactcccctctgaatccgtacatgtacgtgttgaacgatgggacagtcacc
tgtgaagaggacctgagggtggtcagcacctgcaggatggacgtccataagttccccttc
gacacacagaagtgcaccatctccattgggtctgcgatacactgcgttgatgagctccgt
atcttccctttctccaacgcgtctcgagccacccagttttcccgagaggtgatgaagtct
cagggggagtgggagttcctcgatctgtccatctccagcaacaacttcaccttcggcatt
aaacagtgggaacagctcatatacactttcaccatgaagaggaggcccctcctccacgtc
atcaacttcctgttacccatcctgttcttcctgagtctggacatcgcctccttcttcatc
gcagaccatcgaggagagaagctgggcttcaaagtgaccgtgctgctggccatctccgtc
ctgctgctcatcctgaatgacatccttccctccatgtccaacaagactcctctcatagcg
acctactgcattgtgatctttgctatgatgctgctcagcctgctggagacgattctggta
acgtatctcatggagaaagactctgcttcctacgagaagctcaggctgaagaacaacttg
gaggaacaacaggagaaagtcaataactgtaacacagaggagaaaagagaaaactgctgt
ccatgcatctgcaaagtgtctgacagtgagaaacaacatgagctgctgccggtggctgaa
gtggttaacaacagcattcagtggcgagagtctcacgtgttgctgctgatcctggaggag
ctgaaggagctgcagcacactctgaatctacacctgaactgcagacaccaaccctgctgt
caccagacctctgcccacctgtccccacccccacgtcactcactacctaactgtattaat
gaaagtgcagctgtgtccggtgatgcacctcgatgtagtcaccacagtcacaagggcaac
cgatttgttgatgccatgatgcttactggtttcatctttctgctcttcctcacagatggg
gtgttacctgagaataactgcagttatcaggatgttttgaaccacctgcagctgaccaaa
accaatgagctgtactcaatgacccgccccgttaaaaactacaagcgccccacacaggtt
tctctggaagtgctgctctatgccattctggatgtg
DBGET
integrated database retrieval system
