Notothenia coriiceps (black rockcod): 104957593 Help Entry 104957593         CDS       T04920                                  Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism ncc  Notothenia coriiceps (black rockcod) Brite KEGG Orthology (KO) [BR:ncc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ncc03000]     104957593 Transcription factors [BR:ncc03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     104957593 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DUF4819 HMG_box HMG_box_2 Zf_WRKY19 Motif Other DBs NCBI-GeneID:  104957593 NCBI-ProteinID:  XP_010783538 UniProt:  A0A6I9P9K1 LinkDB All DBs Position Unknown AA seq 1450 aa AA seqDB search MRPLKKHRGRSPPLTRGRGGKRRGGSQPLQEKDPKRVKRETLVKTTQHTPNTPAHKQTPP TALNTNEEPITNSNTPSGEEATELRKPVESGEKIAQKADEKTEKEKIVSTNGNNLLAINT VAFPPSAPTPLSTATPPPATNHVPSVGSVSSRKTATFKARIPKKKYTYEHFANNALTTIT TSNPALIHNSYCTINNRISGIINTPNNNSKNNVTNYKSINSTTSNTTSGINNMTNSSAGS HTFINSSNSRSNNCSGNQPSVLTVDSEATEANHFVSTEDKALRTADSQEKDSRARENESE GAPHSARSSSTDTASEHSADLDAMEATGPNLHQKNSHYPAPLHKWHHKSPSLSEGLAEAL AKGMKNQRVLARRPKRRMNNGGDSLTLSPAFRPGVVRGVSGETVEVQLQGDETLVKYPFH VGTVMASPSGAESTVEFILDAPPPGLAPVAVRTQVCVPFGGDEGGPLLYREGVVIQVDPH PGVSFPYQVLLSEDAETLGEEKEGRKALAVWVSRQSLRLLTPPWEVQQLDGGRAKERERE REREERERREEMEVEREVCQLSIGMGVLGGGARLGHGFSHEGVAGGHPYGNALPTPHSST VSSSVAGSTVHGEKSPNREREKQPDTPEEDVEVSRYNTAGPKTNDDTSQHRNILSKSSHY PPSSPHLSVVGGLGPPCPSTLASPQPPHSPALLVSTTPNLPPSKTTPTQTPTPTSGVGSS STSSRSRTPLSLAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRH LSMRTKEMEGGGGGGSSSGTVTPDLRGRASSEFEWDDTSRESSEAGSRGDSRPHLVLPSI LPHDLSSRFDFDECEAATMLVSLGSSRSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPAN FSPITASPILQHRRHRQPSGTGGGGGSKVSAGGGERERHTSGIQPSFHSNLMFTVPMSPS KRKPDAPLPPPLPSHHHDYTPKTEQESGDLNSSFRVLSPHTQASRTHTPTFSRPRGVTTP SSRPPSSTNVSPPPLLVSPTPPSPLTPDGGPRRVVPVSQQALRDSPVIVRNPEVPMAKFT ECGNEGGGDKSSSKDLTPLAPQSIQGLQVPVPINAAAATVPNGTILLRSPSQTLVLASPT PSSLPTADPPAAAPLQALSVTVSTTVTAPAPSSTDTSADENRGTGFGGEVQQPVPCHPSP TALLPLILPAENLHPAPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASSL PGEGQHPVNHPQAASLKTDCQGVAAQSQEPAEAPPMVERGPPSRPTPSSDEPPPEKEKGD AERERPDSETESDVDDPFLPGVVPEPPLAISPVKRRTQSLSALPKDGDKSSPGKREKDHI RRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVHTCN YQQMYQHKWQ NT seq 4353 nt NT seq  +upstreamnt  +downstreamnt atgagaccactaaagaagcacagagggcgttcacccccgttaacgagaggcagggggggg aaaaggagaggaggctcgcagcccctccaagagaaagaccccaaaagagtcaagagggag acgctcgtcaaaaccacacagcatacacccaacacccccgcacacaaacagaccccgcca acagccctgaacactaacgaagaaccaatcacaaatagcaatacccccagcggggaggag gcgactgagctgaggaaacctgtggagtcaggagagaaaatagcacagaaggcagacgaa aagacagaaaaggagaagatagttagcacgaatggaaataatcttttggccattaatact gtagcatttcctccctctgccccgacgccactctccacagccacgccccctccggccacc aatcacgtccccagtgtaggctcagtctctagtaggaaaacagccacattcaaggctcgt atacccaagaaaaaatacacatatgagcactttgctaacaatgccctgaccaccattact acctccaaccctgcactcatacacaacagttactgcactattaataacagaatcagtggt attattaatacacccaataataattccaagaacaatgtaacaaattataaaagcatcaac agtactacgagtaacactacaagtggcattaacaacatgactaacagtagtgctgggagc catacttttatcaatagcagtaatagtagaagtaataattgctcaggtaatcagccatca gtgctaactgtggatagtgaagctacagaagcaaaccattttgtttccacggaggacaaa gccctcaggacagcagactcccaggaaaaagattcccgagctagggaaaatgagtcggag ggggcccctcactcagcacgctcctcgtccaccgacacagccagcgagcactcggctgac ctggacgcgatggaagcaacaggaccaaaccttcatcaaaagaactcccactacccagct cctctccataagtggcaccataagtcgcccagtctgtcagagggactcgctgaagctctg gccaaaggcatgaagaaccagagagttctcgctcgccggccaaagaggagaatgaacaat gggggtgactctttgactttatcgcctgcgttcagaccaggggtggtgcgtggtgtgagt ggagaaacagttgaagtgcagctccaaggagacgagacccttgttaaataccctttccat gttgggactgtaatggcatcaccttcaggggctgagagcactgtggagttcattttggac gcccccccacccggcctggcacctgtggctgtcaggacccaagtatgcgtgccctttggg ggagatgaggggggtcctctgctgtacagagagggggttgtcattcaggtggacccccac cccggtgtgtcatttccttaccaggtgctcctgagtgaagacgcagagactctcggggaa gagaaagaggggaggaaagctctggctgtgtgggtgtcccgacaaagtcttaggctcctc acccctccctgggaggtccaacagttggacggagggagggccaaagagagagagcgggag agggaaagggaggagagggagcggagggaggagatggaggtcgaaagggaagtgtgccag ttgagtattgggatgggggtgctgggagggggagcaaggttgggccatggtttctcacat gaaggggttgcaggagggcatccctatggtaacgcactcccgaccccccactcctccact gtgtcatctagcgtcgccggcagcactgttcatggagaaaagtcccccaacagagagaga gagaagcagcccgacactccggaagaggacgtcgaggtgtcccgttataacactgctggc cccaagacaaacgacgacacctctcagcaccgaaacatcctctccaagtccagtcactac cccccctcctccccccacctctctgtggtgggaggcctgggacccccatgcccctccacc ctcgccagcccacagccaccccattcccctgccttattggtctcgaccacacctaaccta cctccatcaaagaccactcccactcagacccctactcccacttctggtgtggggtcctcc tctacctcctctcgctccaggacccccctctcattggctcagcagaaatacaagaagggc gacgtggtgtgcacccccaacgggatccgtaagaagttcaacgggaagcagtggaggagg ctgtgctccagggagggatgcatgaaggagtcccagcgccggggctactgctccagacac ctgtccatgaggaccaaagagatggagggaggaggggggggaggcagcagctcagggaca gtcacccctgacctgcgggggagagccagcagtgagtttgagtgggatgacacctcaaga gagagcagcgaggcaggtagcaggggagactccagaccccacttagtgctcccgtccatc ctcccccatgacctctcctcccgctttgacttcgatgagtgtgaggccgccaccatgtta gtgtctttagggagctctcgatctggcaccccctctttttctcccatctccaaccagtcg cccttctcacccgccccttctccctcaccctccccgctgtttggcttcaggccggccaac ttctccccgattaccgcctcccccatcctgcagcaccggaggcacaggcagcccagcggg acagggggaggaggggggagtaaggtatcagctggaggaggagaaagggagagacacact tcaggcatccagccctccttccacagcaacctgatgtttacggtccccatgagccccagc aaacgaaagcccgacgcgcctcttcctcctcccctcccctcacaccaccatgattacaca cccaagacggagcaggagtcgggggacctcaacagctccttcagggtgctgtcgcctcac acacaggcttcccgcacacacacacccaccttctcccgacccagaggagtgacgaccccc tccagcaggccaccgtcctccactaatgtctcccctcctcctctgctggtgtccccgacg cctccttctcccctcactccagacggagggccccgtcgtgtggtccctgtgtcccaacag gccttgcgtgactcccctgtcattgtgagaaatcccgaagtcccgatggccaaatttaca gagtgtggaaacgagggagggggagataaaagttcatctaaagacctcacacccctcgcc cctcagtcaattcagggcctccaggttcccgtccccattaacgctgctgcagccacagta cctaatggcacaattctgctgcggagcccgtcccaaactctggtgctcgcgtccccgacc ccctcttccctgcccaccgctgacccccctgccgccgcccccctgcaggccctgtcagtt accgttagcacaacagtcacagctcccgctcccagcagcacggacacctctgcggacgag aacagggggaccgggtttgggggtgaggtccaacagccggtcccctgtcacccctctccc accgctctgctgcccttgatccttcctgccgaaaaccttcaccccgccccacggaaggac atcatcatgggacgtcccggcacagtgtggaccaacgtagagccccggtcagttccagtc ttcccctggcattcattggtccccttcctggcacccacccaatcagatgcttcttctcta ccaggagagggccagcaccctgtcaaccacccccaagcagccagtctgaagacagactgt cagggggtggcagcacagtcacaagagcctgcagaggcacctcccatggtagagagaggt cctccatcccggcctaccccctcttctgatgagccgcctccagagaaggagaaaggcgat gcggagagggagaggccagacagcgaaacagagagtgacgtggatgacccctttctccca ggcgttgtaccagagcctcccctcgctatatcacccgtgaagagacgcactcagtccctc agtgcgctgcccaaagatggagataagagcagccctggaaagagggagaaggaccacatc cggcgaccaatgaatgcatttatgattttcagtaagcgccatcgagcattggtgcaccag cggcacccgaaccaggacaacaggacagtcagcaagatccttggggagtggtggtatgcc ctgggacccaaagagaaacagaagtatcatgatttagctttccaggtacacacatgcaat taccagcaaatgtatcaacataagtggcaatag

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