Notothenia coriiceps (black rockcod): 104957712
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Entry
104957712 CDS
T04920
Symbol
srebf1
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
104957712 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104957712 (srebf1)
04131 Membrane trafficking [BR:
ncc04131
]
104957712 (srebf1)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
104957712 (srebf1)
Membrane trafficking [BR:
ncc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104957712 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
104957712 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104957712
NCBI-ProteinID:
XP_010783673
UniProt:
A0A6I9P9Z7
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MNSMSFDDPSLDNLDPTLSLHDPNDIDTALLSDIDDMLQLINNQDMEFGGLFDNPPYTVP
PPAQELPGLTQSIILPSPPTTTTTSVPPPPSSILSSSPHLDALLGPPITRSSSTPDKAFQ
PPTFQLSPLAKVPNSTLRLQPASPPQAQALRQPQVEQPQPILSPSAPAKAASPHGSPTPN
PAFTSTPQAIFTAPAPTSPPPPQPLPQLQPQPQQQALHNQPQSQQILINYSTVNSYTTAS
PSSVSQPTAILSSSPPSVQPMTIQAQLQGLTTTSPLVATSVSPPLQTIAPNVQQVQQVQQ
VQQVQQVQQVQQMQQMQQVPVLLQPQFIKAESLLLTTMASSTSLSSTTPVQSTSLQAFMG
GGTILTTLPVMMDTDKMPINRIAISGKPFGVPHKGEKRTAHNAIEKRYRSSINDKILELK
DLVAGSEAKLNKSAVLRKTLDYIRFLQSTNQKLKQENMAFKMAAQKNKSLKDLVAMEVDT
PADVKNELPTPPASDVGSPTSFSHCSSDSEPDSPMVEDTKPTVGIVDKSAAGGSAGGMLD
RSRMALCAFTFLFLSLNPLAALLCASGSSSAGSSAATPHTGRSVLGVDIAVESWGWMDWM
LPTLLVWLVNGVLVSGVLVRLLVYGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQ
NLWTCLKALGRPLPISQLDLACSALWSLLRFCLQRLWVGRWLAARAGGLRSDRPLKEDAC
KSSRDAALVYHRLHQLHMTGKLNGSHLSAVHMALSAVNLAECAGSCLPVASLAEVYVSAA
LRVKASMPRILHFTSRVFLSSARQACLSSSGSVPPAMQWLCHPLGHRFFVDGDWAIRSTP
KESIYSQAGNTVDPLAQVTQAFREHLLEKALYCVAQPHGEKSPNQGEGEYADALEYLQLL
ISASDAAGATSQSFAIGSNMATVTGCDPHSKWWSSVTVVIINWLQGDDAAAERLYPTVEH
LPRSLQNAESLLPKACLNTFRAVRALLSKPENCQLSLSYSDKASALLRDSLNLGPHCHSS
SLDKVLQQLLCDRVVVSPLALSRWXCRQTDRQTFVXVTIPPPHLSPFISFQLFLHEATAR
LMAGASPTRTHQLLDRSLRRRATPGAKTEECETRPGQREQAEAVMLACRYLPPSFLSAPG
QRVGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatgtcttttgacgatccttcgttggataacttggatccaactctatcgctt
catgacccgaatgatattgacacggctctcctaagcgacattgatgacatgctacagctc
atcaacaaccaggacatggagtttggaggactgtttgataaccccccatacacagtgccc
cctcccgcccaagagcttcctggattgacccagtctatcatcttaccttcccctccaacc
accaccaccacttctgtacctccacctccctcctccatcctaagcagtagcccccacctg
gatgcactcctgggccctcccatcacccgcagctcctccactccagacaaggccttccag
cctcccacctttcagctgtcccccctggccaaggtacccaactccacactaaggcttcag
ccggcctcccccccacaggcccaggccctcagacagccccaggtggagcagccacaaccc
attctcagcccttcggccccggcaaaggcagcttcacctcatggatcaccaacaccaaac
ccagctttcacctccacgccccaggccatcttcactgcgccagcccccacatctccacct
ccaccccagcccctgcctcagcttcagcctcagccccagcagcaggcacttcataaccag
cctcagtcccaacagatcctgatcaactacagcaccgtgaacagctacacaactgccagt
cccagcagtgtgagccaacccaccgcaatcctgtcatcctcgcctccaagtgttcagcca
atgaccatccaggctcagctccaagggctgaccaccacgtctcccctcgtggccacgtca
gtgagcccgccgctgcaaaccatcgcacccaacgtacagcaagtacagcaagtacagcaa
gtgcagcaagtgcagcaagtgcagcaagtgcagcaaatgcagcaaatgcagcaagtacct
gtgttgctgcagccgcagttcatcaaggcggagtctctgctgctgaccactatggcttcg
tccacctccctgtccagtaccaccccagtacagagcacttcactgcaggcctttatgggc
ggaggcaccatcctgaccacgctgccagtcatgatggacactgataagatgcccattaac
cgcatcgccatcagcggcaagccgtttggcgtgccacacaagggagagaagcgcacagcc
cacaatgcaattgagaagcgttaccgctcctctattaatgacaaaattctcgagctcaaa
gatctggtggctggttccgaggccaagctcaataagtctgcagtgctgaggaaaaccctc
gactacatccgtttcctgcagtcgaccaaccagaagctcaaacaggagaacatggcgttt
aaaatggcagcccagaaaaacaagtctctcaaggacctggttgccatggaggtcgataca
ccggctgatgtgaagaatgagctgcccaccccacctgcttccgacgtgggctcccccacc
tctttctctcactgtagcagtgactcagagcccgacagtccgatggtggaggacactaag
cctactgtgggcatcgtggacaaatccgcagcaggaggcagcgctggtggcatgttggac
cgttcccgcatggcgttgtgcgccttcaccttcctcttcctctctctcaaccctctggct
gccctgctctgcgcatccggcagcagctcagctggaagctcagcagccacacctcacaca
ggaaggagcgtcctgggtgtggatatcgcagtggagtcgtggggctggatggactggatg
ctgccaaccttactggtgtggctggtgaacggtgttctggtgtcgggggttctggtccga
ctgctggtgtatggagagcctgtcaccagaccacactctggatcctctgtgttgttctgg
aggcaccgcaagcaggctgacctggacctggctagaggagatttcgcccaggccagtcag
aacctgtggacgtgtctaaaagctcttggtcgtcccttacccatctcccagttggaccta
gcctgttctgcgctctggtccctgctaaggttctgcctccagcgcctctgggtgggccgc
tggttggctgccagggcaggagggctgcggtctgaccgccccctgaaggaggacgcctgc
aaaagcagccgggacgccgccctggtttaccatcgcctgcaccagcttcacatgacaggc
aagctgaatggcagccacctgtcagcagtgcacatggctctgagtgcagtgaacctggca
gagtgtgctggctcctgtctgcctgtagccagtctggctgaggtctacgtgtccgcagct
ctacgggtcaaagccagcatgccaaggatcctgcattttacttctcgtgttttcctgagc
agcgcccgccaggcgtgcctgtcgtccagtggcagcgttcctccagctatgcagtggctg
tgtcaccctctaggtcatcgcttctttgtggatggggattgggctattcgcagcactcct
aaagaaagcatctacagccaggcgggcaatactgtggatcctctggcccaggtgactcag
gctttcagggaacacctcctggagaaagctctgtactgtgtggctcagcctcacggagag
aagagccccaaccagggagaaggggagtatgctgatgccctggagtatctccagctgttg
ataagtgcatcagatgctgctggagccacctcccagtcctttgccatcggctccaacatg
gccactgtgaccggctgcgacccccactccaagtggtggtcctcggttaccgtggtgatt
atcaattggctccaaggagatgacgccgcagcagagagactgtacccaactgttgagcac
ctgccgcgcagcctgcagaacgcagagagtcttctgcccaaggcgtgtctgaacacattc
agggcggtgcgggctctgctgtccaaacctgaaaactgccagctgagtctaagctacagc
gacaaggccagcgctctgcttcgagacagcctcaacctcggaccccactgccacagctcc
agtttagacaaggtcctgcagcagctcctctgtgatagggtggtggtctcccctctggcg
ctcagcagatggtgatgccgacagacagacagacagacatttgtatgagtcaccatccct
cctcctcatttatctcccttcatctctttccagttgttccttcatgaagctacagccagg
ctgatggcgggggccagtcccacccgcacacatcagctcctggatcgctcgctgcgacgc
agggcaacacccggagccaaaacagaggagtgcgagacgcggccgggccagcgggagcag
gcggaggctgtgatgctggcgtgccgctaccttcccccctccttcctgtcggcccccggc
caacgggtgggcatgctggcagacgctgcccgcaccctggagaagctgggagacaagagg
accctccacgactgccagcaaatgatcatcaagctgggcagcggcactactgtcaccaac
agctag
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integrated database retrieval system
