Notothenia coriiceps (black rockcod): 104957767
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Entry
104957767 CDS
T04920
Symbol
obsl1
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104957767 (obsl1)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
104957767 (obsl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_6
Izumo-Ig
Ig_4
Ig_5
C2-set_2
Receptor_2B4
VEGFR-1-like_Ig-like
VPS13_VAB
Motif
Other DBs
NCBI-GeneID:
104957767
NCBI-ProteinID:
XP_010783730
UniProt:
A0A6I9P7T9
LinkDB
All DBs
Position
Unknown
AA seq
2223 aa
AA seq
DB search
MDIFGGAPRVLGYPRPVLVQCGTDATLRCQIGGDPRPDVIWERKNIQILSEGRYKLSEEG
KAYSLTVTGVTLQDAGQYICKAINSVGETCAAASLKVEGEAQQVNGMQPPMKENGGFEGH
QNGYSTVNNGEHRKQQEEVDLTSDDKPRFLIKPLSLRVDRGEDAAFSCKIWGTPLPEVTW
EKDGKKLNDIFESAHYNISNQDGNWFQLKIYRTRMPDKGVYTCRAVNRNGEALVGAVLLV
EPVPEREESKMSSNGQTNSQWSPKQRSGRLSLSRVIEEPPVRVSKAKKFAVAEGKHAKFR
CFVTGKPKPEIIWKKDGIPLLPGRRHLIFEDREGYYTLKVLYCKVQDTGLYVCAASNALG
NTLSAVHLSVKGPVVRFRRPLRDVEVQEREVAVLECEVPDESLPSAWYLEDRRLMPSNKY
GMEQKGTTRRLTIQDVGMDDDGVYLCEMPDGGKSIAELSVKGSIVRKLPRKLEVLEGENA
VFCVEVEHDDMEILWFKDGLMLHETQQTILKSFGRTHILVFVNVAYQDTGVVTFVSGRSK
TSSRLKVKATRHLPPICPVEAKMNVDGLNGALLTWVTAPNSQTSTRSIFVVERQAVGSQE
WHKCFTSESATSADITSDSVPCEGDYRFRLCCINKYGRSGHVEFPKVVHIVPGPKICSRL
KGCEVLEGEEAKFSIELSAPMVGTWFLNSAQLQHGGRFSLQQSQTRHSLVICETRTAEDS
AEVTFIANGVRDSAVLKVIRRCNIWYFCEIKSFFKRLGFMYFLEFLQFFLFFFIAAVIKF
SPQSNVDSNKRVETGDAIVLYCEVSHPFAKVCWFKDGQELQVTDGLNIQSDGNMRRIVIQ
SADASRSGVYTCETSGDVITFNVDVAGPSVEFSPIPKEDLHKSSMELDPVVLLCNVSQDD
AEVVWYKDGCEIQPTENITLQAEGTMRRLIIRSAETSDAGSYTCQTGNNSMDFTVNVREP
PVMIVEPKDDIVMESYISEEVNLQCELSRSSGKVRWYKDGQEMDESDNVKLISEGPYRRL
TILNGSVGDGGEYVCETDGDSVFFQLNVKEPLVRIISPSEPEVELTHSASERMELSCEIS
QADAPVRWYKDSMEVEESPNLILEVDGAHRRLVIPFTSVDDAGEYICDTEDDSVSFLVTI
DEPPVTLTRPENTPEKLESFAGKPIVLEIVVSRPGAEVKWWLNGREVEESSNIAITEEGL
IHRLTIHSATPEDSGKYTCDAAEDKIDFEVKVSEPPVKILRKSEIKINLKSLISDDIVLE
CELSRANAVSKWYKDNCRVEDDERFCQEEEGAFRSLVILAAELGDSGEYFLDVGDDNISY
HVIVEEPPVTITGNSNDSDNQEMVAGDELILACEVSRANAPVQWFCNEKLLTSDSRTYIE
SYGTLRKIIISNVQPSDSGKYVCDAGDDKMINVVKIQEPPVTFVNKEDDIVVTGYEAESV
TLESYVSKENAMVRWMKDWTPVEGERTQALVEGHKRTLTINPLRRSDAGEYTCDVNTDQI
RFGLLVKEKRIKFVMPLRDTVAHADGMVTLRCEVCKPKADVQWLRNGEEVVPGRRFTIRA
DGVERSLTIHRLIKEDAGEYACESKDDRSVAMLRVEMPRVVEFLTELHNTTVLEGEDATF
KCVVSPEDIQLVWLLDNEPITLGDRFQANQNGLCHTLFIKKCQILDCSKITAEAEGQMSK
ASLKVQEAQVMFIKKMEAVMAEEFGDATLETEISLETGEVQWMRQGVVIQPGPRHTLAQN
GCKRSLSIQNLNLSDRGTYRCETLHDRTQVKLNVEPRKITIRKGLTDQETLERETASFEV
ELSHTDVEGIWQKDGIRVKANNQWRVSTNGLVHSLTLSNLSLEDTGTIVFTAEGARTSAR
LTIKETPVSLLKLLTDVSVEEELPVTLECEFSRQNIEVKWLKDGKELKAGKNCRIYSMGR
KRFCQIMQCTRADSGTYTCDTGEINTSCSLEVNEHKLEIVHNLEDLYIQEDQNAVFMCEV
SLEEVPGEWFKEGHKIRPTSTIKIRTEGSKHFLLMCNVKAEDAGEVRFVAKDVESTAYLE
VEELPVSIVKPLRDRTALEKHRVILECTVSTPRSSATWYKGSEELVSSDRIEILSDDCSH
KLVIQEVSVEDEGTYTIEVGEHTSKAKLMVEAQALVMVKELEDDEVTEPEAASFQCEVSV
DINKAPLWNLNGETLQTGPSVRLESHGTVHKLTLKNTSVDMSGVVKFTLGKAKSSATLTV
KEK
NT seq
6672 nt
NT seq
+upstream
nt +downstream
nt
atggatattttcggaggtgctcctcgagttctgggctacccacgccctgtgctggtacag
tgtggcacagacgcaaccctgaggtgccaaattggtggtgaccctcgtcctgatgtgatc
tgggagcgtaaaaacatccaaatcttgtctgagggacgctacaagctttctgaggagggg
aaagcttactcactaaccgttactggagtaactctgcaggatgctggccagtatatttgc
aaggccataaatagcgtaggtgaaacatgtgcagcagcctctctaaaagtggagggagag
gcccagcaggtcaatggtatgcagccaccaatgaaggaaaatggaggatttgaaggacat
cagaatggatacagcacggtgaataatggtgaacacaggaaacaacaagaggaggttgat
ttaacgtctgacgataaaccgcgattcctcatcaagcccctctctttgcgcgtggaccgc
ggagaagatgctgccttctcctgcaaaatctggggcacgcctctgcctgaggtgacgtgg
gagaaagacgggaagaagctgaatgatatatttgagagtgcacactataatataagcaat
caagatggcaactggttccagctcaagatctacaggacgcgcatgccggacaaaggagtc
tacacctgcagggccgtcaaccgcaatggcgaggccttggtcggtgccgtccttcttgtt
gagcccgtaccggagcgagaggagagtaaaatgtcctcgaacggtcaaactaacagccag
tggtcgccgaagcaaagaagcgggaggctcagtctgtcgagggtcatagaggagccacct
gtcagggtgtctaaagccaagaagtttgccgtggcagagggtaaacacgccaagttccgc
tgctttgtgacagggaagccaaagccggagatcatttggaagaaagatgggattccacta
ctacccgggaggcgccatctgatatttgaggacagagagggttactacacgctgaaggtt
ctgtactgcaaagtgcaagatacaggactgtatgtgtgtgcagcttcaaacgcgcttgga
aacaccctcagcgctgttcacctgtcagtcaaaggtccggttgtgcggttcaggcgtcca
ttaagagacgtggaggtacaggagagggaagttgccgtgctggagtgtgaggtacctgat
gagtcgctcccctctgcctggtacctggaggaccggcggctgatgcccagcaataaatac
gggatggagcagaaaggaaccacacgaagactgaccatccaggatgttgggatggacgac
gatggagtttacctctgtgagatgccggatggagggaagagcatcgcagagctatcagtt
aaaggttctattgttcgtaaacttccccggaagctggaggtcctggagggggagaacgct
gtgttctgcgtggaggtggagcacgatgatatggagatcctctggttcaaagacggcttg
atgcttcacgagactcagcagaccatcctgaagtcatttggcagaacgcacattctggtc
tttgtcaacgtggcctatcaagatacaggggtagttacttttgtctcagggagatccaag
acttcatcgcgtctcaaagtcaaagcaacaagacatcttcctcctatctgccccgtggaa
gccaaaatgaatgtggatggactcaacggcgctcttctcacctgggttactgctcccaac
agccagacctccacccgatccatttttgtcgtggagagacaggcagtgggctcccaagaa
tggcataagtgtttcacctcagagagcgccacttcagcggatatcaccagcgacagcgtt
ccgtgcgagggcgactaccggttccggctctgttgcatcaacaagtacgggcgaagcggc
catgtggagtttcccaaagttgtccatatagttcctgggccaaagatctgcagcaggctc
aaaggttgtgaggttctggaaggagaagaagctaagttctccatcgaactgtctgcacca
atggttggaacttggtttttgaacagcgctcaactgcagcatggcggacggttttcatta
caacagtcccaaacgcggcactcattggtaatctgtgaaactcgcaccgcagaagactcg
gcagaggtcacgttcatagccaatggagtccgggattcagctgtgctcaaagttatacgt
aggtgtaacatctggtatttctgtgaaattaaaagcttctttaaacgtctgggatttatg
tatttcttggagtttcttcaattttttctttttttctttatagctgctgtgatcaaattc
agtccacagtcaaacgtggacagcaataagagggtggaaactggtgacgccattgtactc
tactgtgaagtctcccaccctttcgcaaaagtctgctggtttaaagatggccaggagctc
caagtgacagacggccttaacatccaatcagatgggaacatgaggaggattgtgattcaa
tcagctgatgcgtcccgctctggagtttatacatgtgaaacttctggagatgtcattaca
ttcaatgtggacgttgcaggtccttctgtggagttcagtccgatcccaaaagaggatctt
cataagagcagcatggagctggaccccgtagtgctgctatgcaatgtctcccaagatgat
gccgaagtcgtgtggtataaggatggctgtgagatccagcccactgaaaacatcactctg
caggcagagggaaccatgaggaggctgatcatccgctctgcagaaacttcagatgctggc
agctacacctgccagacaggaaacaatagcatggactttaccgtcaatgttagagagcct
ccagtgatgattgtggaacctaaggatgatattgtgatggagagctacatctcagaggag
gtcaacctgcagtgcgagttgtctcgctccagtgggaaggtgcgctggtataaggatggc
caggagatggatgaaagtgacaatgtaaagctgatatctgaaggtccttacaggaggctg
accatcctcaacggctcagtgggcgatggcggagagtatgtttgtgaaacagatggagac
tctgtctttttccaacttaatgtcaaggagcccctggtaagaatcatttccccaagtgaa
ccagaggtggaactgacacattcggcatccgagaggatggagctcagctgtgagatctct
caggcggatgccccggtccgctggtacaaagacagcatggaggtagaggagagtcctaac
ctgatcctggaggtggatggggcccatcgccggcttgttataccctttacatctgtggat
gacgcaggggagtacatttgtgacactgaagatgactctgtgtccttcctggtcactatt
gacgagcccccagtaactcttactcgtccagaaaacacgccggagaaactggagagtttt
gctggcaaaccaatcgtcctggagatcgtagtgtcccggcctggtgccgaagtgaagtgg
tggctaaatggcagagaagtagaggagagcagtaacattgcaatcactgaggaagggctc
atccatcgtctgacgatccactctgccaccccagaggattctgggaaatacacctgtgac
gctgctgaggataaaatagattttgaggttaaagtttcagagccaccagtgaagatccta
agaaagtcagagattaagataaatctgaaatctctgatttctgatgacattgtgctggag
tgtgagctctccagagccaatgctgtcagcaaatggtacaaggacaactgtcgtgttgag
gacgatgaaaggttctgccaagaggaagaaggggctttccgctcattggtcatcctcgcc
gctgaacttggagactcgggagagtacttcctggatgtcggagatgacaatatcagctac
catgttatagtagaagagccgccagtgacaataactggcaactcaaatgactctgacaac
caggagatggtggcaggcgatgaactgatcctggcctgtgaagtgtcccgtgccaacgcc
cccgtccagtggttctgtaatgagaagttgctaaccagtgactcccggacctacattgag
agctatggcactctgaggaaaattatcatctcaaatgttcaaccctcagactctgggaaa
tacgtgtgtgatgctggggacgataagatgatcaacgttgtcaagattcaagaacctcca
gttacgtttgtgaacaaggaggatgacattgtagtgacaggttacgaagcagagagcgtg
actttggaaagctacgtttccaaggaaaacgccatggtacgttggatgaaagactggacg
cctgttgaaggtgaacgtacccaagctctcgtggagggccataagcgcaccctaacaatc
aatcctttgagacgctctgatgctggcgagtatacatgtgacgtcaacacagaccagatc
cgcttcggcctgctggtgaaagaaaagaggataaagtttgtgatgccactacgagacact
gtggcccatgcagacggtatggtgacccttcgctgtgaggtgtgcaagccaaaagcagat
gtccagtggctgaggaatggagaggaggtggttccgggcagaaggttcactattcgggcg
gatggagttgagagaagcctgaccatccaccgtttaatcaaagaggatgctggagagtat
gcctgtgagtccaaagatgaccggagcgtggcaatgctgagagttgagatgccaagagta
gtggagttcctcacagagctccacaacaccactgtgctagaaggagaagatgctacgttc
aagtgtgtggtgtcccctgaggatatccagctggtctggctcttagacaatgagccaatc
acgctgggtgatcgtttccaggcaaaccagaacggcctgtgtcacaccttgttcatcaag
aagtgccagattttggactgttctaagattacagcagaggcggagggacaaatgagcaaa
gccagcctcaaagttcaggaggctcaggtcatgtttataaagaaaatggaggccgtcatg
gcggaagagtttggagacgccaccttggagacagagatcagcctggagacgggagaggtt
cagtggatgaggcaaggagtggtcatccagcctggtccccgacacacgctggcccagaac
ggctgtaaacgcagtctcagcatccaaaacctgaacctgtcagacaggggaacctaccgc
tgcgagactctgcatgaccggacgcaggtcaagctcaatgtagaaccacgtaaaatcacc
atccgtaaaggcctgactgaccaagaaaccttagaacgagagactgcttcctttgaggtg
gagctatcccacacagatgtggagggaatctggcagaaggatggcatcagggtgaaagcg
aacaaccagtggagggtaagcaccaatggcctggtccacagcctcaccctgtccaacctc
tccctggaggacacgggcactattgtcttcacagctgaaggggcgcgcaccagcgctagg
ctcaccatcaaagagactccggtgtctttactgaaattgctaactgatgtcagtgtggag
gaggagttgccagtcactctggagtgtgaattctccagacaaaacatcgaagtcaaatgg
cttaaggacgggaaggagctgaaggcggggaagaactgtcggatctactccatgggccgg
aagcggttctgtcagatcatgcagtgcacccgggctgactctggaacatacacatgtgac
acgggggaaatcaacacttcctgttcactggaggttaatgagcataagttggagatagtg
cacaatctggaggacctttacattcaggaggaccagaatgctgtcttcatgtgtgaggtt
tctctggaggaggtccctggggagtggttcaaagaaggccacaagatccggcccacaagc
accatcaagatccgcactgaagggtccaaacacttccttctgatgtgtaacgtcaaagct
gaggatgctggggaagtccgctttgtagccaaggatgttgaatctacagcttacctcgaa
gtagaagaactccctgtttctattgtaaaacccctgcgagatcgaacggccctggagaaa
caccgcgtgatccttgaatgcaccgtttccacgccacgctccagcgcaacctggtacaag
ggcagtgaggagctggtttcctctgatcgaattgagatcctgtctgacgactgctcacac
aaactggtgatccaggaggtgtctgtggaggatgagggcacctacaccatcgaggtcggg
gagcacacatccaaagccaaactgatggtggaagcccaagcccttgtaatggtgaaagag
ctggaggatgatgaggtaaccgagcctgaggccgcatctttccagtgtgaggtgtctgta
gatataaacaaggctcctctgtggaatttaaatggagagactcttcagacgggcccctct
gtccgcctggaaagccacgggacggtccacaaactcaccttgaaaaacaccagtgtggac
atgagtggggtggtcaagtttaccttgggcaaggccaagagcagtgccacactcactgta
aaggaaaagtag
DBGET
integrated database retrieval system
