Notothenia coriiceps (black rockcod): 104958032
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Entry
104958032 CDS
T04920
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
ncc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104958032
03015 mRNA surveillance pathway
104958032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104958032
Enzymes [BR:
ncc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104958032
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104958032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104958032
NCBI-ProteinID:
XP_010784030
UniProt:
A0A6I9P8L1
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAADSIGGLTLKEKPEANGTAAIATDSSSAAAKSEVQEEKKPADED
DKDDKAAQSLLNKLIRSNLVSNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLNGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVEPNNKYPQCLCVSPT
YELALQTGKVIEQMGKQYEEVKLVYAIRGNKLPRGTKLHEQIVIGTPGTMLDWCSKFKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPENCQMLLFSATFEETVLNFAQRIVPE
PNIIKLKREEETLDTIKQYYVLCNSREEKFQALCNIYGAITIAQAMVFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRNGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDRDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKSSMNILNRIQEHFSKNIEKLDTDDL
DEIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcttgggcacaggcggtggacgagcaagaagccgcggcggactcgatc
ggtggcctcacattaaaagagaaaccagaggcaaacggcacggcagcaatagcaacagac
tccagcagtgcagccgcaaagtcggaagtgcaggaagaaaagaagcctgcagatgaagac
gacaaagacgacaaggcggcgcagtctttattgaacaagttaattagaagtaatctagtc
agtaacacaaatcaagtggaagttcttcagaaggatcccaactctccgctctactctgtc
aagtcttttgaggagttgcgactcaaaccacagctgcttaacggtgtgtacggcatgggt
ttcaaccggccatccaaaatccaggagacggccttaccgatgatgctggccgaacctcca
cagaatctgattgcccagtcacagtcgggaacagggaaaacagctgcttttgtcctggcc
atgctcagtcatgtagaacccaacaacaaatatccccagtgcctgtgtgtgtcacctacc
tatgaactggcactccagactggcaaggtaatcgagcagatgggaaaacaatatgaggag
gtcaaactcgtctacgccatcagaggaaacaaattgccacggggcacaaagctgcatgaa
cagatcgtcattggcacgcctggtaccatgctggactggtgcagtaaattcaagttcata
gaccccaagaagatcaaggtgtttgtgcttgatgaggccgacgtcatgatcgccacacag
ggtcaccaggaccagagcatccgcatccagaggatgctgcctgaaaactgccagatgtta
ctgttctccgccacgtttgaagagactgtgttgaacttcgcccagcgcattgtgcctgaa
cccaacatcatcaagttgaagagagaggaggagacgctggataccatcaaacagtactat
gtgctgtgcaacagcagagaggagaagttccaagccctgtgtaatatctacggagccatc
accatcgcccaggccatggtcttctgccatacaaggaagactgcgggctggctggcaggc
gagctgtccagagaaggccaccaggtggcgctgctcagcggagagatgcaggtggagcag
agggccgctgtcatcgatcgcttcagaaacggaaaggagaaagttctggtcactacaaac
gtctgtgcccgaggtatcgacgtcgagcaggtttctgtggtgatcaacttcgaccttcct
gtagacagggatggtaacccggacaacgagacatacctgcacaggattggccgcacaggt
cgatttggcaaaagaggactggccatcaacatggtggacagcaagtcgagcatgaacatc
ctcaacaggatccaggagcatttcagtaagaacatcgagaaactagacacggatgatctg
gatgaaattgagaaaatcgccagctaa
DBGET
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