Notothenia coriiceps (black rockcod): 104958151
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Entry
104958151 CDS
T04920
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104958151 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104958151 (chrna5)
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
104958151 (chrna5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Cadherin_5
Motif
Other DBs
NCBI-GeneID:
104958151
NCBI-ProteinID:
XP_010784164
UniProt:
A0A6I9P177
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MLRAGGAATSLALLLLLPLLCCCCHLCHSLRVPKLSAFAKAEDKLFKYLFVNYQKWVRPV
EYLNQTISVKFGLAISQLVDVDEKNQRMTTNVWMKQEWTDRKLRWNPDDYQGLTAIRVPS
NRIWLPDVVLYDNSDGRFEGTVTKAVVKYDGTITWTPPANYKSACTIDVTFFPFDLQNCS
MKFGSWTYDGSQVDITLEDFHVDKRDYFDNGEWEIVKATGSRGLRTDSSCTYPTITYYFI
IRRLPLFYTLFLIIPCIGLSFLTILVFYLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPS
SSKTIPLIGEYLVFTMIFVTLSICITVFAINIHHRSSSTHHGMAPWVRRIFLHRLPKLLC
MRSHVDRYSPADIARAGGLGMMKNSKSELTPLLYTRHNLQAALDSIRYITMHVVKENEVR
EVVQDWKCVAQVLDRVFLWAFLVVSILGSALLFIPVIYKWASIIVPNHAGSTL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgttgagagcagggggggcagccacctctctggcactgctgctgctgctgccgctgctc
tgctgctgctgccacctgtgccactcgttgcgggttccaaaactctccgctttcgcaaaa
gcagaggataagctgttcaaatacctctttgtaaactaccagaaatgggtccggccagtg
gaatacctgaaccagacgatcagcgtgaagtttggcctggccatctcccagctagttgat
gtggatgagaaaaatcaacgaatgacaaccaatgtgtggatgaaacaggagtggactgac
aggaaactaagatggaatcctgatgactatcagggccttacagccatccgagtcccttct
aacaggatctggcttcccgacgttgtactgtacgataattcagatgggcgtttcgaggga
actgtcactaaggcagttgttaagtatgatggaaccataacgtggacaccaccagccaat
tacaaatcagcctgcaccattgatgttaccttcttcccttttgacctccagaactgctca
atgaagtttggctcttggacatatgatggctcccaggtggacataactcttgaggacttc
cacgtggacaagcgggactattttgacaacggtgaatgggagatagtgaaggccacaggc
agccgtggtctgaggacagacagcagctgcacctatcccaccatcacctactatttcatc
atccgccggttgcctcttttctacacactcttcctcatcataccctgcattggcctgtcc
ttcctcaccatcctcgtcttctatctgccctctaacggtggcgagaagatctctctctgc
acctctgtcctggtgtcgctcacagttttcctcctggtcattgaggaaatcattccttcc
tcttccaagactatccctctcatcggggagtacctggtcttcactatgatcttcgtcaca
ctctccatctgcatcacagtctttgccatcaacatccaccatcgctcctcctctacacat
catggcatggcaccgtgggtgaggaggatcttcctacatcgactgcctaagctgctgtgc
atgcgcagccatgtggaccgatactctccagctgatatagccagagcaggaggactgggt
atgatgaagaactcaaaatctgaacttacacctctgctctacaccagacataacctacaa
gcagctttggattctattcgctacataaccatgcatgtggttaaagaaaatgaggtccga
gaggtggttcaagactggaaatgtgtagcccaggtcctggatcgagtgtttctttgggcc
ttcctcgtggtgtcgatcctgggctctgcgctcctcttcattcctgttatttacaaatgg
gccagcataatcgtccctaaccatgctggaagtaccctctaa
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