Notothenia coriiceps (black rockcod): 104958250
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Entry
104958250 CDS
T04920
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncc00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ncc01100
Metabolic pathways
Module
ncc_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104958250
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
104958250
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104958250
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
104958250
Glycosyltransferases [BR:
ncc01003
]
O-Glycan biosynthesis
Glycosaminoglycan
104958250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
104958250
NCBI-ProteinID:
XP_010784276
UniProt:
A0A6I9PEB2
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All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MGASDAYNSHRPKDKLRLDSNNNENSVPKDFDTIDSNSNSNLGARRQRFPLVNSKRKLDK
AQAQSMLGKPANEVLKFPPVQPRGVGPHNNRTHVHKPHPQVPTVPIPVQGSDQFHTAKRS
STLPPPGVVVKKEQPQCEISGKEAISALSRAKSRECRQQIVEIYCKHKNKALMPERVPRY
CPIEGKANVNVQWDEDPSGSAQLVPARMAFVLVVHGRSSRQFQRLFKAIYHTSHYYYIHV
DQRSNYLYKEVLSLAGQYPNVRVTPWRMSTIWGGASLLTMYLRSMEDLLKMSDWSWDFFI
NLSAADYPIRTNELLVAFLSKYRNMNFIKSHGRDNARFIRKQGLDRLFLECDTHMWRLGD
RKIPEGIAVDGGSDWFLLNRPFVDYVVNSRDELVSSMKSFYAYTLLPAESFFHTVLENSA
HCETMVDNNLRLTNWNRKLGCKCQYKHIVDWCGCSPNDFKTSDLPRFQQASRPTFFARKF
EASVSQEIINQLDSYLFGSHPSGTPGLQAYWENIYEHETDGPASLSDSTLSHYHAFARMG
LSRAASSLQGHPNDNSCRFMSTSHPVSVHLYFLSDKFQGYLLRHVATNRASAQLESLETW
VTSKDHYTPASPPQPNNRLQHVQVGADWDPKERIFRNWGGLLGPRDEPVAVQRWSRSQSN
LTATVVWIDPTNVIAATYDILVDASAEVTHYRPPLSPPLRPGLWTLRVLHHWNLLGQTSF
IMAPLEFHRQQPIQQARGVLPYVCYLILPSSLGGLSSDFGSGLAELQGVSLQRCMMGHTL
GPMEQTSAADQWPSSRRSSQRRSGTPVRPALASASSTAPRLTGSRSTGFRPWKLCSM
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagtgatgcctacaattcccaccgtcccaaggacaaactccgcctggacagc
aacaacaacgagaactcggtccctaaagactttgacaccatcgacagcaacagcaacagc
aacctgggagcccgacggcagcggtttccactcgttaactccaagcgtaagctggacaag
gcccaagcacagagcatgctgggaaaacctgcaaacgaggtcctcaagttccctccggtg
caacccagaggggtggggccccataacaatcgcacccacgtccataaaccccacccccag
gttccaacggtcccaataccggtgcaggggtccgatcagtttcacacggcaaagaggtcc
tctacgctgccaccgcccggcgtggtggtgaagaaggagcagccgcagtgcgagatcagc
gggaaggaagccatttctgccctgtcccgggccaagagccgcgagtgtcggcagcagata
gtggagatctactgcaaacacaaaaacaaagccctgatgccggagagagtgcctcgctac
tgcccaatagaaggtaaggccaatgtgaacgtacagtgggacgaggacccctcggggtcc
gctcagctggtcccggcccggatggccttcgtcctggtggtccacggccggtcctcacgt
cagttccagcgtctcttcaaagccatctaccacacctcgcactactactacatccatgtg
gaccagaggtccaactatctctacaaagaggtcctgtctctggccggacagtatcctaac
gtccgggtgactccctggcggatgtccaccatctggggcggggccagcctgctgactatg
tacctgcgcagcatggaggaccttctcaaaatgtccgactggtcctgggacttcttcatc
aacctcagcgccgcagactaccccatcaggaccaacgagctgctggtggcgttcctgtcc
aagtaccgcaacatgaacttcatcaaatctcacggcagagacaacgcacgattcattcgt
aagcagggtctggaccgtctgttcctcgagtgtgacacgcacatgtggcgtctcggggac
cgtaagatcccagagggcattgcggtggacggaggctctgattggttcctgctgaaccgg
cccttcgtggactacgtggtgaactccagagacgagctggtcagcagcatgaagagcttc
tacgcctacacactgctgcctgctgagtcatttttccacacggttctggagaacagcgcc
cactgtgagacgatggtggacaacaacctgaggctcaccaactggaaccgcaagctggga
tgtaaatgtcagtacaaacacatcgtggactggtgcggctgctcgcccaacgacttcaag
acctccgacctgccgcgcttccagcaagcgtcgagacccaccttcttcgccaggaagttt
gaggccagcgtgagccaggagatcatcaaccagctggactcctacctatttggatctcac
ccctcggggaccccggggctccaggcctactgggaaaacatctatgagcatgagacggac
ggccccgccagcctatcagactccacgctcagccactatcacgccttcgctcgtatggga
ctgtcccgcgccgccagctcactgcagggacaccccaatgacaacagctgcaggttcatg
tccacgagccaccctgtatccgtccacctctacttcctgtcagacaagttccagggctac
ctgctgcgccacgtggccaccaaccgagcctccgcccagctggagagcctggagacctgg
gtgacctccaaagaccactacacccccgccagccccccccaacccaacaacaggctgcag
cacgtccaggtgggggcggactgggaccctaaggagcgtatcttcaggaactgggggggt
ctgctgggccccagggacgagccggttgccgtgcagcgctggagccgcagccagagcaac
ctgacggccaccgtggtgtggatcgaccccaccaacgtcatcgccgccacctacgacatc
ctggtggacgcgtccgccgaggtcacgcactaccggccgcccctcagccccccgctgagg
cccggcctgtggaccctcagggtgctgcaccactggaacctgctgggccagaccagcttc
atcatggccccgctcgagttccaccggcagcagcccatacaacaagctagaggtgtgctt
ccgtacgtctgctacctgatcctcccgtcctctctgggggggctgagctcagactttggg
tcggggctggcggagctccagggggtgagcttgcagcgctgcatgatgggacacacgctg
ggtcccatggagcagacgtccgcggccgaccagtggccctccagcaggcggtccagccag
agacgcagcggcacccccgtcaggccggcgttggcctccgcctcctccactgcccccaga
ctcaccggcagccgcagcacggggttcaggccgtggaagctctgctccatgtag
DBGET
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