Notothenia coriiceps (black rockcod): 104958456
Help
Entry
104958456 CDS
T04920
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104958456
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104958456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
JmjC
Motif
Other DBs
NCBI-GeneID:
104958456
NCBI-ProteinID:
XP_010784501
UniProt:
A0A6I9PF02
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MYRSTKGASKARRDQINAEIRNLKDLLPISEADKARLSYLHIMSLASMYTRKSVFFTQAG
TAASLEECARFLSFHELSELTQALPGFLMLVTGEGKLLYLSDSVSEHLGHSMVDLVAQGD
SVYDIIDASDHFIMRSNLSVSTSLETDRLFRCRFNTSKSVRRQSAGNKLVLIRARCLSPP
SGAPAAGTYWTANTVWVCFCSPLEPHPGRSGPGADPESTSTPPPADTNLFLPCFHSEHSR
DMRLQTAQQSVSAFLGFDVTDLRSCSWYSLLHPQDLSHASAQHRSLLREGGEGRAEMVVR
VQAQDQSWVWIYMVLQLQPGEIPISSNNYIISESEAWSVRQQLTSEATQLTLVLSSGTSQ
QEGLSLQSPETLSSPDQVFTPGSSGLSAQSFDFSTAGCSMGSSDERGSSAAEAMMVEGDP
RSSISSLEEDSFFKQHPPESPSAASSPTPVTVETVADLDFLTQNILLPPSFQLDPTLPAL
PLPLPPVSTSQAQQQPKEFVCTPPYTPHVVGSNFPFGEPLFSFEPAGTTTPPPSTTTATS
TTSMAPAASSSDPPTTAPSPSPPTSLSTKLPLTLSTTSTDFLFPIEHGSGSLYEKLPPTP
DSPGDDGDCTVMTLPEVRGPLYVDVPFGPLQCPPEGLLTPEASPGKYPYLSFFSLERERE
KERAEISLLAQHISSLAEGFYLDPLLSKLSPPSMSPSSAPPSPFLSPAVETADDVVSGHM
LREFYPIKAWRGLDIPMFLDDDESLFEESILETLLQDTFVPPQSPSLASSPSPMLNPCSP
LSPQTPVCWRQPSQFEGASHFCSVQSAQCNSTAGCGAAAVARAMAMAEGEGLAEEAMEIE
VVSSPVSSCSSIPASPPLILTASPRPAFSTPVASPGPAASCNQSLLEELAVLEPMFGAGA
SIAPGLGQQPELYQLQCHPSPQCFHKDGSGSVPPF
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctcaaccaaaggagcttctaaggctcgacgcgaccagatcaacgccgagatc
cggaacctgaaggacttgttgcccatatctgaagcagataaagcacggctctcatacctg
cacatcatgtcactagcctccatgtacaccaggaaatccgtcttcttcactcaagcgggg
actgctgcgagtctcgaggagtgcgcaaggtttctgtctttccacgagctatcggagctg
acgcaggccctgccggggtttctgatgctggtgaccggggaagggaagctcctgtacctg
tcagacagcgtctccgagcacctcggacactccatggtggatcttgtggcacagggagac
agtgtttatgatatcatcgacgcctcagaccactttatcatgaggagcaacctgtcagtc
tccacctcacttgagaccgaccgtctcttccgctgccgtttcaacacctccaagtccgtg
cggaggcagagcgctgggaacaagctggttctgatacgggctcgctgcctctcccccccc
tccggagcccctgccgccggaacctactggaccgccaacacggtgtgggtgtgtttctgc
tcccctctggagccccacccgggccgctccggccccggggcagacccggagtccacctct
acccctcccccggcggacaccaacttgttcctgccctgcttccactccgagcactcccgg
gacatgaggctgcagactgcccagcaaagtgtgagcgcctttctcggctttgatgtgaca
gatttgcgctcctgctcctggtacagcctcctccacccacaggatctgtcacatgcctcc
gctcagcaccgcagcctattgagagagggaggagagggcagagctgagatggtggtgcgc
gtgcaagcccaggaccagtcgtgggtttggatctacatggtgcttcagctgcagcccggg
gaaatccccatcagcagcaacaactacatcatcagtgagtctgaggcatggtccgtgcgt
cagcagctcacctccgaggcgactcagttgactctggttctgagcagcggcacttctcaa
caggagggtctgagcctccagtccccagagaccctgtccagcccggaccaggtcttcacc
ccgggcagcagcggcctctccgcccagtcctttgacttcagcacggccggctgcagcatg
ggctcctctgatgagcgcgggagctctgcggcggaggccatgatggtggagggagacccc
cgctccagtatctcctctctggaggaagacagcttcttcaagcagcatccccccgagagc
ccctcagctgcttcctcccccaccccagtcactgttgaaacggtagcagacttggacttt
ttgacccagaacatcctgctgccgccttccttccagctggaccccactctgccagctctc
cccctgccactcccccctgtctccacctcacaagctcagcagcagcccaaagagtttgtg
tgtacaccgccctataccccccacgtcgttgggtccaacttccccttcggggagcccctc
ttcagctttgaaccggctggaactaccacccctcctccttctacgacaaccgccacctcc
accacctccatggccccggcagcttcttcctcagacccccctactacggccccaagccct
tctccccccacctccttgtccaccaagctccccctcaccctttccaccacatccactgac
ttcctgttccccatcgagcatggcagcggctctctgtacgaaaaactcccccccacgccc
gacagccccggagacgacggcgactgcacagtgatgaccctgcccgaggttcggggtccg
ctgtatgtagatgttccatttgggcccctccagtgtcccccagagggcctcctcacccct
gaggcgtctcctggtaaatacccttacctctccttcttctccctggagagagagagggag
aaggagagggcagagatctccctgttagctcagcacatcagctccctggcagagggcttc
tacctggatcccctcctgtccaaactgtctcctccctccatgtcaccctcttccgcgcct
ccctcccccttcctgtcacccgccgtagaaactgctgatgatgttgtttcgggtcacatg
cttagggagttttatcccatcaaagcgtggagaggcctggacattcccatgttcctcgac
gatgacgaatctctgtttgaagagagcatcctagaaaccctcctccaagacaccttcgtt
cccccccagtcccccagcctcgcctcctccccctcccctatgctgaacccctgcagccca
ctctctcctcagaccccagtgtgctggcgccaaccctcccagtttgagggagcgagccac
ttctgtagcgtccaatcggcgcaatgtaactccacggccgggtgcggcgcggctgctgtg
gcccgggcgatggcgatggcggagggtgaggggctggcggaggaagcaatggagattgag
gtggtgtcatctcctgtgtcttcctgctcctccatcccagcgtcccctcccctcatcctc
acggcctcccccagaccagccttctccacgcccgtcgcctcgcctgggcccgctgcgtct
tgcaatcagtccctcctggaggaactggctgtcctggaacccatgtttggggcaggtgcc
tcgatcgcccctggcttagggcaacaacctgagttgtatcaactccaatgtcatccatcg
ccacagtgcttccacaaagatgggagtggaagtgttcctccgttctaa
DBGET
integrated database retrieval system
