Notothenia coriiceps (black rockcod): 104958517
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Entry
104958517 CDS
T04920
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104958517 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104958517 (dhx36)
03012 Translation factors [BR:
ncc03012
]
104958517 (dhx36)
Enzymes [BR:
ncc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104958517 (dhx36)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104958517 (dhx36)
Translation factors [BR:
ncc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104958517 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
104958517
NCBI-ProteinID:
XP_010784561
UniProt:
A0A6I9PF68
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MRLMFYRYSDHTIEALEMFDNDDKIDLELILALIRHIVLKEEEGAILVFLPGWSDISSLN
DLLTAQQMFRSDRFVIIPLHSLMPTVNQTMVFKRPPPGVRKIVIATNIAETSITIDDVVY
VIDGGKIKETHFDTNNNISTMTSEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLLDA
YQLPEIMRTPLEELCLQIKILRLGSIAQFLGKALDPPTEKAVNLAIKNLIDLNALDHSEN
LTALGFHLARLPVEPHIGKLLLFGALLGCLDPVFTIAASLSFKDPFFIPLGKEKMADMRR
RVLSRNSKSDHLTIVNAFQGWEEAKQRGSRCEREYCWDNFLSANTLQMLHNMKGQFADHL
MNTGFVSSRDPKDPKSNVNSDNEKLIKAVIVAGLYPKVAMIKPSHSKKRPGVKVYTQADG
KVCIHPKSVNAEETEFNYKWLVYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKDEDQ
ETIAVDQWIVFSSPARIAHLVKSLKKELDSLLEEKIRNPAPVDWQNRQSKDCAVITAIID
LITTQDKPTVSSTKGTLWRPAPRGQHTHFKDGNDDDDDD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcatgttttacagatactccgaccacaccattgaggccctagagatgtttgac
aatgatgacaagattgaccttgagctgatcttggcactgattcgccacattgtgctcaaa
gaggaggaaggagcaatcttggtcttcctgcctggctggagcgacatcagcagtctcaat
gacctgctcacggctcagcagatgttccgatcagatcggttcgtcatcatccctctgcat
tccctcatgcctaccgttaatcagaccatggtgttcaaaaggcctcctcctggagttaga
aagattgtgatcgctaccaatatagccgagaccagcattaccatagatgacgttgtttat
gtgattgacggaggcaagattaaagagacacactttgacaccaacaacaacatcagcact
atgacttcagagtgggtcagcctggccaacgctaaacagaggaaaggacgtgccggcaga
gtgtgtccggggaagtgctatcacctgtacaatggtctcagagccagcctgctggatgcc
tatcagttacctgaaatcatgaggacaccgctggaggagctctgcctgcagatcaagata
ttgaggctcgggtctatagcccaattcctagggaaagccctggaccccccgactgaaaag
gctgttaacctagccatcaagaacctcattgacctgaacgccctggaccattcagagaat
ctgacagcgctgggtttccacctggctcgtctgcctgtggagcctcacatcggcaaactc
ctcctgttcggagccctgttgggctgcctggaccccgtgttcaccatcgctgcttcactc
agcttcaaagaccctttcttcatccccctggggaaagagaagatggcagatatgaggagg
agggtcctgtccagaaactccaagagtgaccatctcactattgtcaacgcctttcagggc
tgggaggaagcgaaacagcgtggttccaggtgtgagagggagtactgctgggacaacttc
ctgtccgccaacacactccagatgctgcacaacatgaagggtcagtttgctgaccatctc
atgaacacaggcttcgtcagcagcagagaccccaaagatcccaaatctaatgtcaactca
gacaatgagaaattaatcaaggcagtgattgtagccggtctctacccgaaggtggccatg
atcaaaccatctcacagcaaaaagaggccgggggtcaaggtgtacacccaggctgatgga
aaggtgtgcatccacccaaaatcagtcaatgctgaagagacggagttcaactacaagtgg
ctcgtctaccacctgaagatgagaacgagcagtatcttcctgtacgattgcactgaggtg
tccccgttctcactgctgttctttggaggagacatcacaatccagaaggacgaggaccag
gagaccatcgccgtggaccagtggatcgtcttcagctccccggcacgcatcgctcacctg
gtcaagagtttaaagaaagagttggattctcttctggaagagaaaattcgtaaccctgct
cctgtagactggcaaaaccgtcagtccaaagactgtgctgtcatcaccgccatcatagac
ctcatcaccacccaggataagcctacagtcagcagcaccaaaggcacattatggaggcct
gctccgagaggacaacacactcacttcaaagacggcaatgatgatgacgatgatgattag
DBGET
integrated database retrieval system
