Notothenia coriiceps (black rockcod): 104958718
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Entry
104958718 CDS
T04920
Symbol
cul4a
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03420
Nucleotide excision repair
ncc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104958718 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
104958718 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104958718 (cul4a)
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104958718 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncc04147
]
104958718 (cul4a)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
104958718 (cul4a)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104958718 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
104958718 (cul4a)
Exosome [BR:
ncc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104958718 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
104958718
NCBI-ProteinID:
XP_010784797
UniProt:
A0A6I9P9D9
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MAEDTRQDKRASFSALTEHNTNGMARSSAVASSKSGASKKLVIKNFKDRPKLAENYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIKQFR
EESLDNLSFLKRINRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHI
VSDSGVQKRTVDGILEQIELERNGETVDRSLIRSLLGMLSDLQVYKDSFEERFLIDTNRL
YAAEGQRLMQQRDVPEYLHHVARRLEEENDRIMSYLDQSTQKPLISCVEKQLLGEHMTAM
LQKGLSTMLDGNRVTELCLLYQLFSKVKGGLPTLLQFWRDYIKSFGGEIVCTPEKDKDMV
QDLLDFKDKMDNVAQNCFARNEGFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNK
EATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDIMIQFKQHMQNQSEPSNIELTVNILTMGYWPSYIPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMF
NEGEEFSVDEIRTATGIEEGELRRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFKH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKETPNQYHYVA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacacccgacaggacaagagggccagcttctcagccctgacggagcataac
accaacgggatggcccggagctccgccgtggcctccagcaagagtggcgcttcaaagaaa
ttagtgatcaagaatttcaaagacaggccaaagttagccgagaactacaccgaggataca
tggctgaagctacgagatgcagtgggagccatccagaacagcacctctatcaagtacaat
ctggaggagctctatcaggcggtagaaaacctgtgttcgtataaagtctcccccacgctg
tacaagcagctacggcaagtgtgtgaagatcatgtgcaggcccagatcaaacagtttaga
gaagagtctttggacaacctttccttcctgaagcgaattaatcgctgctggcaggatcac
tgcaggcaaactataatgatccgaagtatctttctcttcctggaccgtacctatgtgctg
cagaactccctactgccctccatctgggacactgggttggagctgtttcgtacccacatt
gtgagtgacagcggggttcagaaacggacagtagacggcatcttggagcagatagaactg
gagcggaacggagagacagtcgaccggagtctgatcaggagtctgctgggcatgctgtca
gacctgcaggtttacaaagattcctttgaggagaggtttttgatcgataccaatcgtctg
tacgctgcagagggacagcggctgatgcagcagagagatgtgcctgagtacctgcaccac
gtggctcgtcggctggaggaggagaacgatcgaatcatgagctacctcgaccagagcact
cagaaaccacttattagctgtgttgagaaacaacttttaggagaacacatgactgcaatg
ctacaaaaaggactgagcaccatgctggatgggaatcgtgtgactgagctgtgcctcctc
taccagctcttcagcaaggtgaagggcggactccccacactgctgcagttctggagggat
tacattaagtccttcggtggagagattgtctgcactccagagaaagacaaggacatggtg
caagacctgctggacttcaaagacaagatggacaacgttgcacagaactgctttgcgagg
aatgagggattcatcaacgccatgaaggaggccttcgagaccttcatcaacaagaggccc
aacaaacccgctgagcttattgctaaatatgtggactctaagttgagagcgggaaacaaa
gaggctacagaggaagagctggagaggatcctggataagataatgataatcttccgtttc
atacacggaaaagatgtgtttgaggctttttataagaaggacttggccaagcgtctgctg
gttggaaagagtgcttctgttgacgctgaaaagtccatgctctccaagctcaaacatgag
tgcggagcagccttcaccagcaagctggaggggatgttcaaggacatggaactgtccaaa
gacatcatgatccagttcaaacagcatatgcagaaccagagcgagccgagcaacattgaa
ctcactgtgaacatcctcactatgggctactggccttcatacatacccatggaggtccac
ttgcccccagagatggtgaaactccaggaggtgttcaagttgttctacctggggaagcac
agtgggaggaagctgcagtggcagcccacactgggccacgctgtactaaaggcagagttt
aaggaggggaagaaagagctgcaggtgtcgctgttccagacgctggtgctgctgatgttc
aatgagggagaggaattcagcgtggatgagatccgcactgccacaggcatagaggaggga
gagctcaggcggacgctgcagtccctggcctgcggaaaggctcgcgtcctcaacaagaac
cctcgagggaaggacgtggaggacggagaccgcttcaatttcaacaatgatttcaaacat
aaactgttccgcatcaagatcaaccagatccagatgaaggaaacggtagaggagcaggta
agcaccacagagcgcgtctttcaagacaggcagtatcagatcgatgcagctgtggtgcgc
atcatgaagatgaggaagaccctcagtcacaacctcctggtgtcagagctctacaaccag
ctcaagttccccgtaaagccgggcgatctgaagaagcggatcgagtcgctcatagacaga
gactacatggagcgtgacaaggagactcctaaccagtaccactatgttgcctga
DBGET
integrated database retrieval system
