Notothenia coriiceps (black rockcod): 104958758
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Entry
104958758 CDS
T04920
Name
(RefSeq) F-box only protein 30-like
KO
K10307
F-box protein 30
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104958758
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104958758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF_2
F-box_4
F-box
F-box-like
Extensin_1
Motif
Other DBs
NCBI-GeneID:
104958758
NCBI-ProteinID:
XP_010784853
UniProt:
A0A6I9PDG6
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MESLHSHCMKCIKRRCMVRPEPGVCCDLIGCPLVCGAVFHSCKLEEHRLLCAYERLPCIN
RGFGCPFNITRIRMAKHLEKCPASIVCCTMEWNRWPVSYADRESYENLSKDFDEVEQLDM
ALALQDQRMLLESLKVTTTVSKDKDHKKMSNGASNVPEVVEMEEEKEEESVYNGGFRASL
ETSRSLAAALDILTNSKDIEVIVGGLNGGKNHVYAAEGGKNVDMKEEDSDSDCELGAVGG
VDCAVGTEDWVEERDFVELFFEEKEVESIDEEEETIEDSQLVYPVLPLNSLPMALLSQDF
LQAPLLPPNFLQAPALRADFLPVVQRPPGFLPVIQRPPGFLPVVQRPPGFLPVVQRPPGF
LPVVQRPPGLLPVVQRPPGLLPVVQRPPGLLPVVQRPPPATPVPFRLSDHVMRNGFLQHL
PSELRFRCLERKLQSVEVLRGISMFTFNGRRALLSDPYLFRAKMEDKSVDTSDLEVTDDP
MGLHGIDLITAALLFCLGDSPGGRGISDSRFVDGYHIDFGTQTFSFPSAILATNTMVGDV
SSASACDHANPQLSNPSPFHTLRLDLVLECVARYQTKQRSMFTFVCGQLFRRDEFSSHFK
NVHGDIHAGLNGWMEQRCPLAYYGCTFSQRRFCPSVQGFRIIHDRHLGSFGVKPGPPRCR
RRVGCDGDQLSGLPFEVLQHVASFLDSFSLCQLSRVSRTMREVCGSLLQMRGMVVLLWNK
IRRADGSSSWQITDKVRKIVFL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggagagcctgcactcccactgcatgaaatgcatcaagagacggtgcatggtgcgcccg
gagccgggggtttgctgcgacctgattggctgccctctggtctgcggggcggtgtttcac
tcctgtaaactggaggagcaccggctgctgtgtgcctacgagcgtctgccctgcatcaac
agaggcttcggatgccctttcaatatcacccgcatccgcatggccaaacatctggagaag
tgtccggctagcatcgtttgttgcaccatggagtggaacagatggcccgttagctacgca
gaccgcgagtcctacgagaatctgagcaaagactttgacgaggtggagcagctggacatg
gctctggctctgcaggaccagaggatgctgctggagtctctgaaggtcaccaccaccgtg
tccaaggacaaggaccacaagaagatgtccaacggggcgtcaaacgtacctgaggtggtg
gagatggaagaggagaaagaggaggagtcggtgtataacgggggcttcagagcctccttg
gaaaccagcaggagtttagccgccgctctggacatcctcaccaactccaaggacatcgaa
gtgatcgtgggggggttgaacggagggaagaaccatgtttacgcagcagaaggggggaag
aacgtggacatgaaggaggaggattcagattcagattgtgagctgggagcggtgggagga
gtggactgtgcagttgggacagaagattgggtggaggagagagactttgtggagcttttc
ttcgaggagaaagaggtggagagcatcgatgaagaggaagaaaccatcgaggactcccag
ttggtgtatccggtacttcctctgaactctcttcccatggcgctgctttctcaggacttc
cttcaagctcctttacttcctccaaacttccttcaagctccagcgcttcgtgcagacttc
cttcccgtggttcaacgacctccaggctttcttcccgtgattcaacgacctccaggcttc
cttcccgtggttcagcgacctccaggctttcttcccgtggttcagcgacctccaggcttt
cttcccgtggttcagcgacctccaggccttcttcccgtggttcagcgacctccaggcctt
cttcccgtggttcagcgacctcctggccttcttcccgtggttcaacgacctcctccagcg
accccggtgcccttccgtctgtcagaccacgtgatgcgtaatggcttcctgcagcacctc
ccctcagagttacggttccgctgcctggagaggaagcttcagagcgtggaggttctccgg
gggatcagcatgttcacttttaacggccgccgggcacttctatccgacccctacttgttc
cgagccaaaatggaggacaagtctgtggacacgtcggatctggaggtgacggacgacccg
atggggcttcacggcatcgacttaatcaccgcggcgcttcttttctgcctcggcgactcc
ccggggggtcgcgggatctccgacagccgcttcgtggacggatatcacattgatttcggc
acccagacgttctccttcccctccgctatcctcgccaccaacacaatggttggagacgtg
tcttcggcgtccgcttgtgatcacgccaacccccaactctccaacccgagcccgttccac
acgctgcgtctggacctggttctggagtgcgtggctcgataccagacaaaacagcgttct
atgtttacgtttgtgtgcgggcagctgtttcgacgggacgaattctcctcgcacttcaag
aacgtgcacggggatatccacgcgggtttgaacggatggatggagcagcgttgtcctctg
gcgtattacggatgcactttcagtcaacgtcgcttctgcccctcggtgcaaggtttccgg
atcatccacgaccggcaccttgggtccttcggggtgaaaccaggccccccgaggtgtcgc
aggagggtagggtgtgacggggatcagctgagcggccttcccttcgaggtgctgcaacac
gtggcctccttcctggactccttcagtctgtgccagctgtccagggtgtcccgcaccatg
agggaggtgtgtggcagtctgctgcagatgagaggcatggtggtgctgctgtggaacaag
atcaggagagcggacgggtcctcatcgtggcagatcactgacaaggtcaggaagattgta
tttctctaa
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