Notothenia coriiceps (black rockcod): 104958849
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Entry
104958849 CDS
T04920
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00900
Terpenoid backbone biosynthesis
ncc01100
Metabolic pathways
Module
ncc_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104958849 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ncc01006
]
104958849 (fdps)
Enzymes [BR:
ncc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
104958849 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
104958849 (fdps)
Prenyltransferases [BR:
ncc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
104958849 (fdps)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
104958849
NCBI-ProteinID:
XP_010784968
UniProt:
A0A6I9PDS0
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MRGLRSLVINAPQIFRTMWSEVSPFKLKTTSALLCTSSIQGDSICNGTHSSKKALLSDPQ
LFEAQFDELVTELSERDLSDPALADALSRLREVLVYNSPGGKRNRGLSVIGSLRELLPPT
ELTQETVQRALVVGWCIELLQAFFLVADDMMDGSVTRRGQPCWYKKDGIGLDAINDSFLL
EAAIYRLLRRHCREQPYYVHLLELFTETSFQTELGQALDLMTAPPGQIDLSRFTMARYKA
IVKYKTAFYSFYLPVAASMYMAGIESEEEHNNAKHILLEMGEFFQIQDDYLDCYGDPAVT
GKIGTDIQDNKCSWLVVTALEIMTAEQRAELEACYAQHDDACVEQVKALYNTLQMPALYH
KYEEESYQRLQKLIACHAQNLPHSVFLNFAKKIYKRNK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtctgcgtagcttggtcattaatgcccctcaaatattccgcacaatgtggagc
gaggtctctccgttcaaattgaaaacaacatctgctttgctgtgcacctcgtctattcag
ggagacagcatttgcaatgggacgcacagcagcaaaaaggcgttgctctcggaccctcag
ttgtttgaagcccagtttgacgagctggtgacggagctttcagagagggacttatctgac
ccggcgctggctgacgcactcagcaggttaagagaggttttggtgtacaactcccctgga
ggcaagaggaaccgaggcctgtctgtgattggctcactgagggagctactcccgcccact
gagctcacacaggagaccgtgcagagggccctggttgtgggatggtgcattgagttgctt
caggcatttttcctggtggcagatgatatgatggatggatctgtgactcggagaggacaa
ccctgctggtacaaaaaggatgggattggtctggatgccatcaatgattcgtttctcttg
gaagcggcgatctacagacttctgcgcagacattgccgggagcagccctactacgtccac
ttactggagctatttactgagacctctttccagaccgagcttggccaagctctggacctc
atgacggccccccctggtcagattgacctcagcagatttacaatggcaagatacaaagct
attgtgaaatacaagacggccttttactcattttatctcccagtagcagcttcaatgtac
atggcaggaattgagagtgaggaggaacacaataatgccaaacacatcttacttgagatg
ggagagttctttcaaatacaggatgactacttggactgttacggagaccctgctgtgact
ggaaagattggtactgacatccaggataataaatgcagctggctggtggtgacggccctg
gaaataatgactgccgaacagagagcagagctcgaggcatgttacgcgcagcatgatgat
gcctgtgtggagcaggtcaaagctctgtacaacaccctgcaaatgccagctttgtaccac
aaatatgaggaagagagctaccagcggctccagaaactcatcgcgtgtcacgctcaaaac
cttccccactcagtcttcctcaactttgctaagaaaatatacaagaggaacaagtga
DBGET
integrated database retrieval system
