Notothenia coriiceps (black rockcod): 104959004
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Entry
104959004 CDS
T04920
Name
(RefSeq) tripartite motif-containing protein 35-like
KO
K12012
tripartite motif-containing protein 35
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104959004
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104959004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
U-box
Prok-RING_4
zf-Nse
zf-RING_4
GLTP
zf-RING_6
Apolipoprotein
FapA
UPF0242
IMD
Motif
Other DBs
NCBI-GeneID:
104959004
NCBI-ProteinID:
XP_010785150
UniProt:
A0A6I9PBJ3
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MASRPEDNLLCPICHAVFTHPVILSCSHSFCRACWQRWWTLRSNRRCPVCNATSQQYDPP
CNLALKNLCEASPPEKHSAVFCSLHSEELKLFCEDHQTPVCVICLHSSSHNNHSFRPINE
VALGYREGLRILLEPLKETLDLFKDMKSNLDQSNKDIEDQAKDAETQINKEFSMLQELLK
KEQKARTGAVMKEKKQKSLVLKWKMEDLSRDIEALSDKVRATEEVLKAGNISFLQNYTTA
ADGVDGFQLKDPQPIKDGLIDTFKHLDNLPLQVLDSMKKAITRSRSGPPLAVAILPQMDI
DIETRL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgtccagaggacaatctcctatgtccaatctgccatgcggtcttcacacac
cccgtcatcctgtcatgcagccacagtttctgcagagcctgctggcagcgatggtggaca
ttaaggtcgaatcgcaggtgtccagtctgtaacgcaacatctcaacaatacgacccacct
tgtaacctcgctctgaagaacttgtgtgaagcttctccacctgagaaacactctgctgtg
ttttgcagtttgcactctgaggagctcaaactcttctgtgaggaccatcagactccagtg
tgtgtgatctgtctgcattcaagctcccacaacaaccacagcttcagaccaatcaatgaa
gtcgctctgggttacagagagggactccggatactcctggagcctttaaaggaaacactg
gatctcttcaaggacatgaaatcaaaccttgatcagtccaacaaggacatcgaagaccag
gctaaagacgcagagactcagatcaataaggagttctccatgcttcaggagttactcaaa
aaagaacagaaagcaagaacaggtgccgtgatgaaggagaagaagcagaagagtctggtc
ctgaagtggaagatggaggatctgagcagagacatagaagctctttcagacaaagtcaga
gccacagaggaagtgctgaaagctggaaatatctccttcctgcagaactacacgactgca
gctgacggagtcgatggtttccagctgaaagatccacagccgatcaaagatggtctgata
gatacgttcaaacacctggacaacctgcccctccaggtgttggacagcatgaagaaagcc
atcacacgttcaagatcagggccgcccctggcagtggcgatcctgccccaaatggacata
gacatagagactagactatag
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integrated database retrieval system
