Notothenia coriiceps (black rockcod): 104959024
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Entry
104959024 CDS
T04920
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03030
DNA replication
ncc03420
Nucleotide excision repair
ncc03430
Mismatch repair
ncc03440
Homologous recombination
ncc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104959024 (rpa3)
03420 Nucleotide excision repair
104959024 (rpa3)
03430 Mismatch repair
104959024 (rpa3)
03440 Homologous recombination
104959024 (rpa3)
03460 Fanconi anemia pathway
104959024 (rpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncc03032
]
104959024 (rpa3)
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104959024 (rpa3)
DNA replication proteins [BR:
ncc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104959024 (rpa3)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104959024 (rpa3)
MMR (mismatch excision repair)
104959024 (rpa3)
DSBR (double strand breaks repair)
HR (homologous recombination)
104959024 (rpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_3
DUF7572
Motif
Other DBs
NCBI-GeneID:
104959024
NCBI-ProteinID:
XP_010785175
UniProt:
A0A6I9PBL8
LinkDB
All DBs
Position
Unknown
AA seq
122 aa
AA seq
DB search
MAGIYDVPKPRIICSMLSQNINKPVCFVGRVEKVHPSGKTFTVCDGEGKTATVELNDPLD
EELSGVVEVIGMVSNKGVIMATTYNLLREDKGVPFDLELYTEALKVIHDFPQHYPFQMAL
SG
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatatatgacgtcccgaaacccagaataatctgctctatgttgtcgcagaac
atcaacaaacccgtctgcttcgtcggtcgtgtggaaaaggtccacccgtcggggaagacg
ttcaccgtttgtgatggagaagggaaaacagccactgtggagctgaatgatcctctggac
gaggagctgagtggagtcgtggaggtgatcgggatggtttccaataaaggggtcatcatg
gccacgacctacaacctgctgcgagaggacaagggcgtcccttttgatttggagctgtac
actgaggctctgaaagtgatccatgacttcccgcagcactacccgttccagatggctctc
agcggatga
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integrated database retrieval system
