Notothenia coriiceps (black rockcod): 104959165
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Entry
104959165 CDS
T04920
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like isoform X1
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04080
Neuroactive ligand-receptor interaction
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104959165
04082 Neuroactive ligand signaling
104959165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104959165
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
104959165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF2754
Motif
Other DBs
NCBI-GeneID:
104959165
NCBI-ProteinID:
XP_010785333
UniProt:
A0A6I9PEN7
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MMDAWLLLLALLAIAGGGLGADTEERLVEHLLNPAHYNKLIRPATNGSELVTVQLMVSLA
QLISVHEREQVMTTNVWLTQEWQDYRLTWIPEEFDGMLKVRLPSKHIWLPDVVLYNNADG
VYEVSFYSNAVVSHDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTLRFRSWTYDRTEIDL
VLRADVASMDDFTPSGEWDIIALPGRRNENPADPTYVDITYDFIIRRKPLFYTINLIIPC
VLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTM
VLVTFSIVTSVCVLNVHHRSPTTHTMPPWVKLVFLNKLPALLFMRQPRNSCERQRLRQRR
RAQEQKEGGRSGEAGALMVGLGLGNAGGSGGGTSTGVFSKEDSEPCTCYVNRASVKQFGG
DLGGAGGSMDGLNRVRESREGGAGNVPRGKQAAGGPALTQTLLAQACPGFEEAVEGVRFI
ANHMKSEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTLGMFTQPLYQNYTVKTITSS
PG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgcctggctgctgctgctggctctcctcgccattgcgggaggaggcctgggg
gcagacacagaggaacgtttggtggagcatctcctaaacccggcccactacaacaaactg
atccgtcctgccactaatggctccgagctggttaccgtgcagctgatggtgtcgctggcc
cagctcatcagcgtgcatgaacgagagcaggtgatgaccaccaatgtctggctcacacag
gagtggcaggactatcgtctgacttggatccctgaggagtttgatgggatgttgaaggtc
aggctgccctcaaaacacatatggctgcctgacgttgtgctctacaacaatgctgatggg
gtgtacgaggtgtcgttctactctaacgcggtggtgtcccacgatggcagtatcttctgg
ttgcccccggccatctacaaatccgcctgtaagatcgaggtgaagcacttccccttcgac
cagcagaactgcacgctgcgcttccgctcctggacctacgaccgcaccgagatcgatctg
gtgcttcgagctgacgtggccagcatggacgacttcacgcccagcggtgagtgggacatc
atcgcgctgccaggcagacgaaacgagaacccggccgaccccacctacgttgacatcacg
tacgacttcatcattcgcaggaagcctcttttttacaccatcaacctcatcatcccgtgt
gtgctcatcacctctctggccatcctggtgttctacctgccctccgactgtggagagaag
atgacgctctgcatctccgtgctgctcgccctcactgtgttcctgctgctgatctccaag
atcgtcccccccacttctctagacgtccctctggtggggaagtacttaatgttcactatg
gtcctcgtgactttctctatcgtcaccagcgtgtgtgtgctcaatgtgcaccaccgctcc
cccaccacacacaccatgcccccctgggttaaactggtgttcctcaacaagctccctgct
ttgctcttcatgcggcagcccaggaacagctgtgagcgccagcggctgcgccagcgaaga
cgggcacaggagcagaaggagggggggcgcagtggggaagcaggggccctgatggtgggg
ctcgggctgggcaacgctggggggagcggaggggggacctccacaggggtgttcagcaag
gaggacagtgagccttgtacctgctatgtgaaccgggcgtctgttaaacagttcggaggg
gatctgggaggagcaggagggtccatggatggtctgaacagggtgagggagagccgggag
gggggcgctggaaacgtgccccgggggaagcaggcggctggaggacctgctctgactcag
accctgctggctcaagcctgtccgggcttcgaggaggccgtggaaggggttcgcttcatc
gccaaccacatgaagagtgaggatgatgatcagagtgtgagcgaggactggaagtacgtt
gccatggtgattgaccgcctcttcctgtggatcttcgtgtttgtgtgtgtgttcggcacg
ctgggcatgttcactcagccgctctaccagaattacacagtcaagaccatcaccagctcg
ccaggctga
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