Notothenia coriiceps (black rockcod): 104959322
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Entry
104959322 CDS
T04920
Symbol
nup155
Name
(RefSeq) nuclear pore complex protein Nup155
KO
K14312
nuclear pore complex protein Nup155
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104959322 (nup155)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104959322 (nup155)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104959322 (nup155)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
HTH_Tnp_1_2
Motif
Other DBs
NCBI-GeneID:
104959322
NCBI-ProteinID:
XP_010785493
UniProt:
A0A6I9PF19
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MPSGAGPSSPAAAIAEALENSSRLIDKHLQEDRCFPDLSELLSVPCHNMPSLSGVSDMDY
PLQGPGLLSVPNLPELSAVRRVPLPPELVEQFSHMQCNCMMGVFPEISRAWLTIDNDIFM
WNYEDGGDVAYFDGLIETILAVGLVKPKQGILQPHIHYLLVLATSVDVVILGLSFPKSQA
GLNDSMSGAMQLLPDPLFSIPTDNTYIISITSTDLGRIFMAGKDGCLYEIAYQAEAGWLS
QRCRKINHSKSSLSFLVPSVLQFSFSEDDPIVQIAIDNSRNTLFTRSEKGVLQVYDLGAD
GQGMSRVATMSQNTIVAVAGNIARTIDRSVFKPIVQISVIDRSESSDCHLLAVTHAGVRL
YFSTTPFSLPHQRHLAVRPSLLALVHVRLPPGFSASSTLQKPAKVHKALHSKGILLMAAS
ETEDSDILWCINHDSFPFKKPLMETQMMSNVDGHSWALCAINEERPSKISSPLNTALIPI
TDSPVVVRQHNIPPQKFVLLSAKGSHIFQKLRPVDQLRHLLVSCAGGESEEVERFFKLHR
EEQACGTALILACSSSACDREVSQWATRAFFRYGGEAQMRFPAAMGSPSTVGPVMSSPAP
GIVPPAFASPFTPMHSGSAPLTPMTAGPEVIFSGKHNGICIYFARILGNIWDGSLAFEKT
VANGSQTVTILESSVSSFDLESVLLELGGLREFLDKNSQFSPSALGAASFSSPANLQQRL
LGFMRPDGANSQQVQQELQRKFHTKAQVYEKVSLQGIQQLVHRCYQTLALLKLLCDHQFS
LIMSELPKEFQEQMKAASFKDVVIRGKELSGALITAVINVYIKDNASVEAISNHLRDICP
LLYSSDDSVCSKANELLQSSKQIQNKADKERTLKESLRLYQQISQHTDLPLVCSQYRQVR
FYEGVLELCLTAADKKDPQRLGPHFYKNGEPEEDGAGQQAFQERLCCYKCITDTMQELVN
QSKAAPQSPSVPKQPGPPVMTSDPNMLSNEEATAHFEQILGLAQRSQDELFHIALYNWLI
QADLTDKLLEVNSPYLEEHLMHMIKQDQSKVHNMDLLWRYYEKNRNFGKAAHVLARLADM
HSTEISLKQRLEYIARAILSAKSSSCISAQASDGEFLHELEEKMELVRIQVQIQDTLIRQ
YSHHPSVKNVISQLDSELMDITKLYGEFADHFKLSECKLAIIHCAGHSDPILVHSLWQEI
MEKEMADSVAMSPADRMRTLSLKLVSLGRIYAGTPRYFPLEFLVKFLEQEVCRLNWDVGF
VTCTMQEIGVQLPRLLEVYDQLFKTRDPCWQRLKKPLHLVECIHVLLSGYVDDPSRVPTY
DRRRFTNVCLDNICGYLVELQSLSPNSALQQTIGNFKSLQAKLEKLH
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccggcgctggacccagcagccccgcagctgcaatcgctgaagcgctggaaaac
tcttcccggctgatcgacaaacatctgcaggaggaccgatgcttccctgacctgtcggag
ctgctcagcgtcccatgtcacaatatgccgtccctctctggagtgtcggacatggactac
cccttgcagggaccgggtttactcagtgtgccaaacctcccggagctcagtgcagtccgc
cgggtccctctgccgccagagctggtggagcagttcagccatatgcaatgtaactgcatg
atgggagttttcccagagatctctcgagcatggcttactattgacaatgacatctttatg
tggaattatgaagatggaggagatgtggcctattttgatggccttattgaaacaattctg
gcagtgggccttgtaaaaccaaaacaagggattttacagccacatatccactacctctta
gtactggccacctcagtggatgtagtgatcctcgggctgagcttccccaagagccaggct
gggttgaatgacagcatgtctggtgcgatgcagctccttccagaccccctcttctcaatc
cccacagacaacacctacatcatttccatcacctccacagacctgggacgcatctttatg
gcaggaaaggatggctgcctttatgagatcgcttaccaggccgaggcgggatggctgagc
cagcgctgcagaaaaatcaaccactccaaaagctctctgtccttcctcgtgccctctgtg
ctccagttctccttctctgaagacgaccccatcgtgcagattgcgattgacaactcccgc
aacacacttttcacacgctcagagaaaggtgtcctgcaggtgtatgacctgggtgccgat
ggacagggcatgagtcgtgtggcaaccatgtctcagaacacaattgttgctgttgctgga
aacattgccaggacaatagatcgttcagtcttcaaacctatcgtccagatctctgtgatt
gacagatctgagtcgtcagactgtcacctgcttgctgtcactcatgcaggtgtgcgtctc
tacttcagcactacacctttctccctcccacaccagaggcacctggcagtgcgacctagc
ctgctggctttggtccacgtccgcctgccgcccgggttttctgcatcctctaccctccaa
aaacctgcaaaggtccataaggcactacacagcaaaggtattctgttaatggctgcttca
gagacagaagacagtgacatcctctggtgcatcaaccatgactccttccccttcaagaaa
cccttgatggagactcagatgatgtctaatgtcgatggacactcttgggctctttgtgct
attaatgaggagagaccatccaagatatcttctcctctgaatacagcactgatccccatc
actgattcccctgtggtggtccggcagcacaacatccctccacagaagtttgtccttctc
tctgcaaaggggagtcatatcttccaaaaactgcggccggtagaccagctccgtcacctg
ctggtgagctgtgctggaggagagagtgaagaggtggagcgtttcttcaagctgcacagg
gaggagcaggcttgtggcacagcactgatcctggcctgttccagttccgcctgtgacaga
gaggtttcacagtgggccaccagagctttcttcagatatggaggggaagcacagatgaga
ttcccagcagccatgggatccccgagtactgttggacccgtgatgagctctccagcacca
ggcatcgtgcccccagcttttgcttcacctttcacaccaatgcattctgggtcggccccc
ctcacacccatgacggctggcccagaggtgatcttctcagggaaacacaacggcatctgt
atctactttgctcgcattcttggaaatatttgggatggaagtcttgcttttgaaaaaacc
gtggccaatgggagtcagactgttactattttggaaagcagcgttagttcatttgatctg
gagtcggtacttttggagctcggcggtttgagggagtttctggataaaaactctcagttc
agtccctcggctcttggtgctgcaagtttcagctcccctgccaacctgcagcaaaggctg
cttggatttatgcgtcctgacggagccaactctcagcaggtccagcaggaactccagagg
aaatttcacaccaaggctcaggtgtatgagaaagtgtctctgcagggcatccagcagttg
gtgcatcgctgctaccagactctggccctcctgaagcttctctgtgatcatcagttcagc
ctcattatgtctgagctgccgaaggagtttcaggagcagatgaaggcagcaagttttaag
gatgtagtgatccggggcaaggagctgtctggagcgctcatcaccgccgtcattaatgtc
tacatcaaagataacgcgtctgtggaggccatcagcaatcacctgcgagacatctgcccc
ctgctgtacagcagcgacgacagcgtctgctccaaggcaaatgaattgctgcagagctcg
aagcagatccagaacaaagccgataaagagcgaacactgaaggagtctctacggctctat
cagcagatcagccaacacacagatctgccgctcgtctgctcccagtacagacaagtgcgt
ttctacgagggcgtccttgagttgtgcctcacagcagcagacaagaaggacccacagagg
ctggggccccacttctacaagaacggagagcccgaggaggacggggcgggacagcaggcc
ttccaggaaaggctgtgctgttataagtgcatcacagacaccatgcaggagctggtgaac
cagagcaaggcggcccctcagtcccccagcgtaccgaagcagcccgggcctcctgtcatg
acctctgaccccaacatgctcagtaatgaagaagctacagctcattttgagcagatcctg
ggtctggcccagcggtctcaggacgagctgtttcacatcgctctgtacaactggctgatt
caggccgacctgactgacaagctgctagaggtgaattctccgtacctggaggaacatctg
atgcatatgatcaagcaggaccagagtaaggtgcacaacatggacctgttgtggcgctac
tacgagaagaaccgtaactttggcaaagcggctcacgtactcgctcgtctcgctgacatg
cacagcactgagatctcactgaagcagcgtttggagtacatcgcccgagccatcctgtct
gctaagagttcctcctgcatctcggctcaggcgtctgacggagagttcctccacgagctg
gaagaaaagatggagctggtgcgtattcaagtccagatccaggacaccctgatcagacag
tactcccatcatccctcagtgaaaaatgtcatctctcagttagactctgagctcatggac
atcaccaagctctacggggagtttgctgaccatttcaaattgtccgagtgcaaactggcc
atcattcactgtgcgggacactccgacccaatcctggtgcactcgctgtggcaggagatc
atggagaaagaaatggcagacagcgtggccatgagtccagcagacaggatgaggactctc
agtttgaaactggtctcactgggaaggatttacgccggaacaccaagatatttccctctg
gagttcctagtgaagtttctagagcaggaagtgtgtcggctgaactgggatgtgggcttc
gtcacttgcaccatgcaggagatcggagttcagttaccgcgcctcctcgaggtctatgac
caactcttcaaaacccgggatccctgttggcagcggctgaagaaacctctccacctggtg
gagtgtatccacgttcttctgtcaggatacgtggatgatcccagcagagtaccaacctat
gacagacgccggttcacaaacgtgtgtctggacaacatctgtggatacctggtggagctg
cagtctctgagccccaactcggctcttcaacaaaccatcgggaacttcaagtccctgcag
gcgaagctggagaaactccactga
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