KEGG   Notothenia coriiceps (black rockcod): 104959385
Entry
104959385         CDS       T04920                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03030  DNA replication
ncc03410  Base excision repair
ncc03420  Nucleotide excision repair
ncc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104959385 (rfc3)
   03410 Base excision repair
    104959385 (rfc3)
   03420 Nucleotide excision repair
    104959385 (rfc3)
   03430 Mismatch repair
    104959385 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncc03032]
    104959385 (rfc3)
   03036 Chromosome and associated proteins [BR:ncc03036]
    104959385 (rfc3)
   03400 DNA repair and recombination proteins [BR:ncc03400]
    104959385 (rfc3)
DNA replication proteins [BR:ncc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104959385 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104959385 (rfc3)
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104959385 (rfc3)
DNA repair and recombination proteins [BR:ncc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104959385 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104959385 (rfc3)
SSDB
Motif
Pfam: DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 DNA_pol3_delta ABC_tran AAA_5 DUF2247
Other DBs
NCBI-GeneID: 104959385
NCBI-ProteinID: XP_010785572
UniProt: A0A6I9PBL4
LinkDB
Position
Unknown
AA seq 356 aa
MSLWVDKYRPTSLGKLDYHKAQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTMAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIEPIRSRCL
AIRVPLPSTEEVCNVLTSICKKEGLLLPPELAKNISDKSGRNLRKALLMCEACRVQQYPF
SADQDVPETDWQVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIMKGLVTELL
SNCDGQLKTEVAQMAAFYEHRLQLGNKAIYHLEAFVAKFMAIYKKFMEDGLDGMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtggacaaatatcgaccaacttccctcgggaaactcgactatcataaa
gcccaagcaacgcagctgaaaaacctggttcaatgtggcgacttccctcacttactggtg
tacggaccctcaggcgcggggaagaagacccgcatcatgtgcctgctgagggagctgtat
ggagccggggtggagaagctgcgcatcgagcaccagacaatcgtggctccctcaaagaag
aaaattgagattaacacaatagccagcaactaccacttggaagtcaaccccagtgatgct
ggaaaccaggaccgtgtggtgattcaagagctgatcaaaaccatggctcagtctcagcag
atccagtcgagcacccagagagagttcaaagttgtgttgctaacagaggtggacagactc
acgaaggatgcccagcatgctttgcgccggacaatggaaaagtacatgtctacctgccgg
ctcatcctctgctctacctccacctccaaagtcattgagccgattcggagccgttgtctc
gctatcagagtccctctgccgagcacagaagaggtctgtaatgtgttgacatcaatctgt
aaaaaagagggtctgctcctcccacctgagctagccaagaatatctctgataagtctgga
cgcaacctccgcaaagcgcttttgatgtgtgaggcctgcagagtgcagcagtaccccttc
tccgcggaccaggacgtcccagagacggattggcaggtgtatctcagggaaaccgctaat
gccatcgtgagccagcaaagcccgcagaggttgttggaggttcgagcgaggctgtacgag
ctgctgactcactgcatcccccctgatatcattatgaagggtctggttaccgagttgttg
agtaactgtgacggccagctgaagacagaggtggcccaaatggcagcgttctacgaacac
agactgcagctgggcaacaaagccatctaccacctcgaggccttcgttgccaagttcatg
gccatctacaagaaattcatggaagacggtctggatggcatgatgttctga

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