Notothenia coriiceps (black rockcod): 104959385
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Entry
104959385 CDS
T04920
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03030
DNA replication
ncc03410
Base excision repair
ncc03420
Nucleotide excision repair
ncc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104959385 (rfc3)
03410 Base excision repair
104959385 (rfc3)
03420 Nucleotide excision repair
104959385 (rfc3)
03430 Mismatch repair
104959385 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncc03032
]
104959385 (rfc3)
03036 Chromosome and associated proteins [BR:
ncc03036
]
104959385 (rfc3)
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104959385 (rfc3)
DNA replication proteins [BR:
ncc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104959385 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
104959385 (rfc3)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104959385 (rfc3)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104959385 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
104959385 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
DNA_pol3_delta
ABC_tran
AAA_5
DUF2247
Motif
Other DBs
NCBI-GeneID:
104959385
NCBI-ProteinID:
XP_010785572
UniProt:
A0A6I9PBL4
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDYHKAQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTMAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIEPIRSRCL
AIRVPLPSTEEVCNVLTSICKKEGLLLPPELAKNISDKSGRNLRKALLMCEACRVQQYPF
SADQDVPETDWQVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIMKGLVTELL
SNCDGQLKTEVAQMAAFYEHRLQLGNKAIYHLEAFVAKFMAIYKKFMEDGLDGMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggacaaatatcgaccaacttccctcgggaaactcgactatcataaa
gcccaagcaacgcagctgaaaaacctggttcaatgtggcgacttccctcacttactggtg
tacggaccctcaggcgcggggaagaagacccgcatcatgtgcctgctgagggagctgtat
ggagccggggtggagaagctgcgcatcgagcaccagacaatcgtggctccctcaaagaag
aaaattgagattaacacaatagccagcaactaccacttggaagtcaaccccagtgatgct
ggaaaccaggaccgtgtggtgattcaagagctgatcaaaaccatggctcagtctcagcag
atccagtcgagcacccagagagagttcaaagttgtgttgctaacagaggtggacagactc
acgaaggatgcccagcatgctttgcgccggacaatggaaaagtacatgtctacctgccgg
ctcatcctctgctctacctccacctccaaagtcattgagccgattcggagccgttgtctc
gctatcagagtccctctgccgagcacagaagaggtctgtaatgtgttgacatcaatctgt
aaaaaagagggtctgctcctcccacctgagctagccaagaatatctctgataagtctgga
cgcaacctccgcaaagcgcttttgatgtgtgaggcctgcagagtgcagcagtaccccttc
tccgcggaccaggacgtcccagagacggattggcaggtgtatctcagggaaaccgctaat
gccatcgtgagccagcaaagcccgcagaggttgttggaggttcgagcgaggctgtacgag
ctgctgactcactgcatcccccctgatatcattatgaagggtctggttaccgagttgttg
agtaactgtgacggccagctgaagacagaggtggcccaaatggcagcgttctacgaacac
agactgcagctgggcaacaaagccatctaccacctcgaggccttcgttgccaagttcatg
gccatctacaagaaattcatggaagacggtctggatggcatgatgttctga
DBGET
integrated database retrieval system