KEGG   Notothenia coriiceps (black rockcod): 104959472
Entry
104959472         CDS       T04920                                 
Symbol
dtl
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncc04121]
    104959472 (dtl)
Ubiquitin system [BR:ncc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104959472 (dtl)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EIPR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_DCAF4 ANAPC4_WD40 WD40_RFWD3 NBCH_WD40 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 MIOS_WD40 WD_LRWD1 WDR54 TAF1C_beta-prop Beta-prop_WDR11_1st Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 104959472
NCBI-ProteinID: XP_010785674
UniProt: A0A6I9P593
LinkDB
Position
Unknown
AA seq 657 aa
MLFRSIVDRGVGKRRQNAVLAHPGPRHPLSSLLGGYHCVRHDEHISYGNLGDSVPPFGLA
FSSVGHMQNVLAAANEEGIVRIYNTESREKPLLKEWMAHENAVFDIAWVPGEPHLVTAAG
DQMARLWDVRSGEMLGSFKGHLCSLKSVSFAPQEKAVFCTGARDGNIMVWDTRCSKKDGF
YRQVNQISGAHNKAETNPLTKTKKRRVSTRGMAPSVDTQQSVTVVLFQDQHTLISSGAVD
GVIKMWDLRKNYTALRQDPVPLQTYPYPGSCMRMRLGYSGLVLDSTRSNIVCNCTDDNIY
MFNVSGTKTTPVAAFSGHQNSSFYVKSTISPDDQFLASGSSDNHAYIWKISEPNQPPMML
QGHSEEVTSVAWCPTDLTKIASCSDDHTVRIWRLHRKMDGAESSVGEANLVGWARPKSPS
GPSIRAETTPAKIQKTESLGGLASPRVAACAPSGAAMPLPSSTTSPIPSQGAKVAAVRQR
TPSSIKKWLSPSRGSPAQASPQPRRVLSLCPQSPASSASPSERRAKRRLETGEGSSAGCE
GAEQCDCVTELYPVAKRSRALSGICCSKQESRLQTDCPTEDSEEQLSQTGKENCSPGPMD
WLSVLGQKMRKGQGSPRSPRSPSASKRQEGKTPVSPTIRSPQSIKKISMYFARRHLE
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgctgttccgctcgatagttgacagaggagtgggcaaacgaaggcagaatgccgtcctt
gcacaccccgggccgaggcaccccctgagctctctgctgggggggtaccactgcgtccga
cacgatgaacacatctcttacggcaacctgggggactctgtgcccccgtttgggctggcc
ttctcctctgtcggacacatgcagaacgtcctggcagcagctaatgaagaaggcattgtt
agaatctacaacacagagagccgggagaagccacttctaaaagaatggatggcccatgag
aacgctgtttttgacatagcctgggtaccgggggagcctcacttggttactgctgctggt
gatcagatggccaggctgtgggatgtgaggtcaggggagatgttaggcagcttcaaaggt
catctctgcagcctgaagtctgtttcattcgcaccacaggagaaagctgtgttctgtact
ggggccagagatggaaatattatggtctgggacaccaggtgcagcaaaaaagatggtttc
tacaggcaggtgaaccagatcagtggcgctcacaacaaagcagagacaaaccccctcacc
aaaactaagaagaggcgggtcagcacacgtggcatggctcccagtgtggacacccagcag
agtgtcaccgtggttctgttccaggatcagcacaccctcatctcctctggggctgtcgat
ggtgtaatcaagatgtgggatctgaggaagaactacactgcactccgtcaggatcctgtt
cctctgcagacgtacccctacccgggttcctgcatgcgcatgagactgggttattccgga
cttgttctggactcaaccagatccaacatcgtatgtaactgcactgatgataatatctac
atgttcaatgttagcggaacaaaaacaactccagtggcagctttcagtggccaccagaac
tcctccttttatgtaaagtccactattagccccgatgaccagttcttagccagcggttca
agtgacaatcacgcatacatctggaagatctcggagcctaatcagcctcccatgatgctc
caaggccatagtgaggaagtgacatctgttgcatggtgtccgacagatttgaccaagatt
gcttcctgttctgatgatcacactgtacgtatctggaggcttcaccggaaaatggatgga
gccgaatcctcggtgggagaggccaatcttgtcggctgggcacgtcctaaatctccctca
gggccttctatcagagctgaaacaacccccgccaagatccagaagactgagagtctcgga
ggccttgcgtccccccgggtcgctgcctgtgctcccagcggagccgcaatgcctctcccc
tccagcaccacctctcccatcccttctcagggtgccaaagttgccgctgtccgccagaga
acaccatcctctatcaagaaatggttgtccccgagccgtgggtctcctgctcaggccagc
cctcagcctcgccgcgtgctcagtctgtgtcctcagagcccggcgagcagcgcctctccc
agcgagcgacgggccaaacgcaggctggagacgggagaggggtcttctgcaggctgtgag
ggggcagagcagtgtgactgtgttactgaactctacccggtggccaagagaagccgggct
ctgtcggggatctgctgctccaagcaagagagccggctacagacagactgtcccacagag
gacagcgaggagcagctttctcagactggcaaggagaactgctcccccggacccatggac
tggctgtcagtgctgggccagaagatgaggaaaggtcaaggaagcccgaggtctcccaga
agccccagtgcctctaagagacaagaaggcaagacaccagtttctccgacaatccgctca
ccgcagagcataaagaaaatctccatgtatttcgcaagaaggcatctggagtga

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