Notothenia coriiceps (black rockcod): 104959533
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Entry
104959533 CDS
T04920
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104959533 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncc03021
]
104959533 (cpsf4)
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104959533 (cpsf4)
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104959533 (cpsf4)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104959533 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_RBM22
zf-CCCH_12
zf-CCCH_4
zf-CCCH_2
Nab2-like_zf-CCCH_
zf-CCHC
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
104959533
NCBI-ProteinID:
XP_010785769
UniProt:
A0A6I9P5H7
LinkDB
All DBs
Position
Unknown
AA seq
166 aa
AA seq
DB search
MQDLLATVDHLKFDLELAMQQQLGAQPLPFPGMDKSGSAVCEFFMRAACVKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGTTCSQNIPACGEKGHYANKCTKGHLAFLSGQ
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacctcctggccaccgtggatcacctgaagtttgacctggagctggccatgcag
cagcagctcggggctcagcctctgcctttccccggcatggacaaatccgggtctgctgtg
tgtgagttcttcatgagagcagcttgtgtgaaaggtgggatgtgtccgttccgtcacatc
agcggagagaagacggtggtgtgtaagcactggctcagaggactgtgtaagaaaggagac
cagtgcgagttcctccacgaatacgacatgaccaagatgcccgaatgctacttctactcc
aaatttggtgagtgtagcaacaaagagtgtcccttcctgcacatcgacccagagtccaag
atcaaagactgtccctggtacgaccgaggcttctgcaaacacggtacgacctgctcacaa
aacatccctgcatgcggtgagaagggccactatgccaacaaatgcactaaaggacacctc
gccttcctgagtggacagtaa
DBGET
integrated database retrieval system
