Notothenia coriiceps (black rockcod): 104959547
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Entry
104959547 CDS
T04920
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104959547 (syde2)
Membrane trafficking [BR:
ncc04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
104959547 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
C2
Motif
Other DBs
NCBI-GeneID:
104959547
NCBI-ProteinID:
XP_010785752
UniProt:
A0A6I9PC41
LinkDB
All DBs
Position
Unknown
AA seq
1693 aa
AA seq
DB search
MADPLRRTLLAKLRGKKSKKGATVGGGYGSAAAANGGREGKEKVLQTQRDSDEARPVVLL
TELDCTTERMSTYENCVDGAMVQTGGVVAVREGLAAELPGALPQEPSSGGRVRVNEELLG
VSLQRNAQFVAHEVDRSHQAPRSTDKTVLSAGVPLGGPHVHRKHFVSVPRQCSGGDSIGF
GDNSNYVLCREPHTGVSKPPEAQVIAADRDGREPRDGGYSRHMADTEVAVNEHNANWSYD
NSQTLGTDLPVCAALEYTHCMSRSTEENIVIRNIESYGPEYAGDMRGTAGSLQSPTFFPT
ELDICDINMASLCATETSLRYPLDSEDDDYYDNEILPFYATIRAKSDGEKAEVTELPRPG
QVKGQLDDSNSAQETDRLRNQLKEAYYLLINAMNDINLDVQQINVGLIEQQANSSCSSHS
RDSLCSRLSAKNMDSDSWSSGGDHSPQQVSDTDSLLLCLSGNFESGLKARLNSKSMVNLS
LTKIRPMLLRSVSDGGIRYTCGQPSLCVKAQTSSGDKGATETKEAEGVRATGVGELSEPQ
VLHNAVSSDELQEAGGDDESSGSVNSLTGSSDSNAEASTNQGDNNKQEPTDARVQRANSV
NKGHGVTVNKMQEWMHKGRLLSSEMKQRIEGSSLPCSGGQSQDRPCSLGNRGVKSVKVKS
PRQHQPAFIENVQTPCANGREVGRANESSLWRPPLTTITVSKKRNWLQQSSLGKNQCTKD
ELQGMLGAEEEGPNQLPPPPSPSPDHLRPSGAAPSRPARLHLPQASIGEAKVSPHPRSID
PAEENDADDEGEIWYNPIPEDDEVETSQRSAVRLLVPHRAEPQRRPSRAGDVGQGGRNLG
GGSGAVPEALGESLGGASGDGVQGNAVHSTEALNLHRQMLACKPQEEGGPSTSRTTDGPD
LPNAVSSPPSSPNPAKKSSSINWSFPDKIKSPRTVRKISMKMKKLPELSRKLSVKGTSSS
SNINNGNGSSHLEPRAHSPRNNVSGSEAVPHSSGPPRLAASGGGQASRNVISRYHLDSSV
STQHSFSKKKSNGSSKSASKGGYLSDGDSPELVAKSGKHGSAEGKGGKSKETEVGGGSSK
LNGTELDIDAFRHYSFTEQPKCSQYISGLMSLHFYGAEDLKPPRIDSRDVYCAIQVDSVN
KARTALLTCRTTFLDMDHTFNIELENAQHLKLVVFSWEPMPRRNRVCCHGTVVLPALFRV
TRSHQLAVKLEPRGLIYVKLNLMDQWKNSLDGGPHGDREPQMFGVEAWRVVERENTGLMV
PLLISMCINEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSYAVELCENTYPDVNVITG
VLKDYLRELPYPLITKHLYEAVMEAMATRPLRIGPSGCENDAGDTEHTVSLLENLPDVER
VTLQKLLDHLKLVASCQEVNKMTCQNLAVCFGPVLLSQRQEASCHTNRVFIDSEELASAL
HFKKHIEVLHYLLQLWPVVDPTGRSSSQPPAASVFLTSSDLLSAPPIRRRKERPQVLNLS
EAEMAGVLRPKPGRLDSPSNRYAGDWSRCGESYFPCETLLPPNREEADYDDVPSEYTEAA
EEEQENPEEDPEEDKEQIVTCPESDSAEQEQPEREQEVKEDRENEKEEEETQEESDSSGN
VQTLEDNEEERVCNHILPPLLPKEHTYQAYMKIQDISPVLSNRVNLKDLQESIDTLIGNL
ERELNKNKLNVGY
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcgaaactccgggggaagaaatccaagaaa
ggagcgacagtcggcggtggatacggctctgctgctgcggcgaatgggggccgagaaggt
aaagaaaaagttttgcaaacgcagcgagactccgacgaggctcgcccggtagtcttgctc
acagagctggattgcacgacagagagaatgagtacgtacgagaattgtgttgacggtgcg
atggtgcaaacagggggggtggtagcagtccgggagggtctcgcagcagagttgcccggc
gcacttccccaggagccgagcagcgggggcagggttcgggttaacgaggagctcctgggg
gtctcacttcaaagaaacgcgcagtttgttgcacatgaggtagataggagccaccaggca
cccagatccactgacaaaaccgtgttatctgcgggggtcccgcttggtggaccgcatgtc
cacagaaaacacttcgtctcggtgccgcggcagtgcagcggaggggactcaattgggttt
ggggacaattcaaattacgttttgtgccgagagccgcataccggggtcagtaaaccgcca
gaggcccaggttattgctgctgatagggatgggagggagcccagagacggaggatattcc
cggcacatggcagacactgaagtggctgttaatgaacacaacgcaaactggagttatgac
aacagtcaaactttggggacagacttgccagtttgcgcagcacttgaatatacacactgt
atgtcaaggagcacagaagaaaacattgtaatcagaaatatagagagttatgggccggag
tatgcaggggacatgcgagggactgcaggcagtctgcagagcccgacgtttttccccaca
gagttagacatatgcgacattaacatggcatccctgtgcgccacagagacgtcactaaga
taccctttagatagtgaagatgatgattattatgataatgaaattttgcctttttatgca
acgatcagagcaaaaagtgatggtgagaaagcagaggttacagagctgccacggcctggt
caggttaaaggacagctggatgacagtaacagtgcacaggaaactgacaggcttagaaac
cagctgaaagaagcgtattaccttctaataaatgctatgaacgatatcaacctggatgtc
cagcagattaatgttggtttaattgagcagcaggccaactcttcatgtagtagccactcc
agggatagcctgtgctcgaggttgtccgccaaaaacatggacagcgactcctggtcatcg
ggaggcgaccacagtccacagcaggtgtctgacactgactcactcctgctttgcctcagt
gggaactttgagtcaggcctcaaagccaggctgaacagtaagagtatggtaaacctgtcc
ctgactaagataagacccatgttactgcgctctgttagtgatggagggatcaggtataca
tgtggtcaaccatcactatgtgttaaagcccagacatccagtggggataaaggggccaca
gagacaaaagaggctgaaggggttagagcaacaggagtaggtgagctctccgaacctcag
gtgcttcacaacgccgtcagcagtgatgagttacaagaagctggcggtgatgacgagagc
agcggctcagtcaacagcctcacgggttcttcagacagcaacgccgaagcatcaacaaat
cagggtgacaacaacaagcaggagccgactgatgcccgagtacagagagccaactctgtc
aacaagggccacggtgtcactgtcaacaagatgcaggagtggatgcacaagggccgtttg
ctgtcctctgagatgaagcaacgcattgagggctcatctttgccgtgcagcggaggacaa
agccaggaccgaccctgctctcttggtaaccgaggggttaaatctgtcaaggtcaagtct
ccacgacagcatcagccagctttcattgagaatgtccaaaccccctgtgctaatggccgg
gaggtgggcagggccaatgagtcatcgttatggcggccaccgctcaccacaattaccgtc
tccaagaaacgcaactggctgcagcaaagctcccttgggaagaatcagtgcaccaaggac
gagctgcaaggaatgctgggggctgaagaggaggggcccaatcagctgccacctcccccc
agtccctctcctgaccacctgagaccctcaggggcagctccatcacggccggcccgccta
cacctgcctcaggcaagtattggtgaggccaaggtgtcccctcatcctcgaagcattgac
ccggctgaggagaatgacgcagatgatgaaggcgagatctggtacaatccaatccctgag
gacgatgaagttgagacctctcagcgatccgccgtccgtctgctggttccccacagagct
gagccccagaggaggcccagcagggcgggggacgtgggtcagggcggcaggaaccttggg
ggcggcagtggcgccgttccggaggcgctcggggaaagcctcggtggcgcttcaggagac
ggtgttcaagggaatgctgtacattccactgaggcactaaatctgcacagacagatgctc
gcgtgcaaacctcaggaggagggggggccttccaccagcagaaccacagatggtcctgac
ctgcccaatgcagtcagctcccctccctccagcccgaacccggccaagaagagcagctcc
atcaactggtccttcccagacaagattaagtctccgcgcaccgtgaggaagatctccatg
aagatgaagaagcttccagagcttagtcgaaaactcagcgtcaaggggacctcgagcagc
agtaacatcaacaacggcaatggaagcagtcatttagagcccagagcccattcaccccgg
aacaatgtgagcgggtcggaggccgtcccccattcctcgggccctcccaggttagctgca
tctgggggagggcaggccagtcgtaacgttatctcccgctaccacctggacagcagtgtg
tccacgcagcacagcttcagcaagaagaaaagtaacggcagctcaaagtccgccagtaaa
ggtggttacctcagtgatggcgactcacctgagctggtggcaaaatctgggaagcacggc
tcggcggaggggaagggcgggaaaagcaaggagacggaggtaggaggtggaagctccaaa
cttaatggcacagaattggacattgatgctttccgccattacagcttcacagagcaaccc
aagtgcagccagtacatctccggactgatgagcctgcacttctacggtgctgaggacctc
aaacctccgcgcattgactctagagatgtgtattgcgccatccaagtggactcagttaac
aaagcacgaaccgctcttctcacatgccgaactaccttcctagatatggaccacaccttc
aacatcgagctggagaacgcccagcacctgaagttggtggtgttcagctgggagccgatg
ccgaggagaaaccgcgtctgttgccacggcacggtggttctgccggcacttttccgggta
acgcggagccaccagctagcggtgaagctggagccgcgggggctgatctacgtcaagctg
aacctgatggaccagtggaagaactcgctggatggcgggccacacggagacagagagccc
cagatgttcggtgtggaggcgtggcgggtggtggagagggagaacacaggactgatggtg
ccactgctcataagcatgtgcatcaatgagatcgagaagagaggctgccaggtagtgggc
ctctaccgtctttgtggatctgcagccgtgaagaaggagctgcgtgaggcatttgagaga
gacagctacgccgtggagctgtgtgaaaacacgtatcccgacgttaacgtcattacagga
gtactgaaggattacctgcgagagctgccataccctctgatcaccaagcacctgtatgag
gcagtgatggaagccatggcaacgaggcctctgcggataggaccatcgggctgcgagaat
gacgcgggcgacacagaacacaccgtcagcctgctggaaaacctgccagacgtggagagg
gtgacactgcagaagcttcttgaccatcttaagttggtagcgtcctgtcaggaagtgaac
aagatgacgtgtcagaacctggcagtgtgtttcggcccggtgctgctcagccagcgccag
gaggcgtcctgccacaccaaccgagtgttcatcgactccgaggagctcgccagcgcgctt
cacttcaaaaaacacatcgaagtcctgcattacctgctgcagctctggcctgttgtggac
ccaactggccgatcttcctctcagccccctgcagcctctgtgtttctgacctcatccgac
ctgctgtcagcgcctcccatcaggcggagaaaagagcgtccccaggtcctgaatctctct
gaagcggagatggcgggcgttctgcggcccaaaccggggcgtttggacagccctagcaac
cgctacgccggcgactggagccgctgcggcgagagctacttcccctgtgaaactctgctg
cctcccaacagagaagaggcggactatgatgacgtgccctcagagtatacagaggcagct
gaagaggagcaggagaatcctgaagaagacccagaggaagataaagagcagatcgttacc
tgccctgagtctgattctgcagagcaggagcaacctgagagagaacaagaggtgaaggag
gacagggaaaatgagaaagaagaggaggagacgcaagaagagagtgacagttcaggcaat
gtgcaaactttagaggacaatgaggaggagagggtttgcaaccacatccttccccctctc
ctgcccaaagagcacacctatcaggcctacatgaagatccaggacatcagccctgtgctg
agcaacagagtcaacctgaaggacctgcaggagagcatcgacactctgataggaaacctg
gagagagagctcaacaagaacaagctcaatgttgggtactga
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integrated database retrieval system
