Notothenia coriiceps (black rockcod): 104959794
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Entry
104959794 CDS
T04920
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104959794 (ubtf)
03021 Transcription machinery [BR:
ncc03021
]
104959794 (ubtf)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
104959794 (ubtf)
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
104959794 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
NOA36
Rv0078B
Motif
Other DBs
NCBI-GeneID:
104959794
NCBI-ProteinID:
XP_010785996
UniProt:
A0A6I9P629
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MNGAMEATTQDKGVVLTFWAQDDLLKLLEAMKLALPQKDLTKYKTSESHLDWTKVAFNSF
TAEMCKQKWSEVSKEIRKFRTLTELIFDAQDYIKNPYKGKKLKKHPDFPKKPLTPYFRFF
MEKRAKYAKLHPEMSNLDLTKILSKKYRELPEKKKKKYVEDFLRDKETFVHSMSKFRELH
PDLMESMTKKGSNAPEKPRTPQQLWYNHEKKAVLKTRPDATTKDIKESLGKQWTQLSDKK
RLKWIAKSLEQQKLYEETMRGYIQQHPELNITQGDISKSTLTKAERHLKDKSEGRPDKPP
PNGYSMFCAELMSSMKDVPSTERMVMCSQRWKLLKQIEKDAYQKRCEQRKKDFEIDMHVF
LSSLSEEEQTRVLSEDKLGFKRGGANSPAAKKKASRAKANPEKPKRPISAMFIFSEEKRP
KMQQERPDVSDSEITRLLARMWNELPDKKKEKYKRLEMVLKAESEKKEKEDRTRLPDPPK
TAQDIWQQSVIGDYLARFKSDRPKAQKAMEATWSIMEKKEKIMWIKKAAEDQKRYERDLC
EMRSPAATIAAGKKMKFEGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMTEIGARWQR
CTLKDKDRYKKIAEEKQRQYKVLLEQWLGSLSSQERNTYKEYNSQKRRTTAKPGGPKAKA
KKSDTEEEDDEEDEREKASTEASSSSEDDDDDEKEADDDDEDDDDEAEDKENKSEDSSSD
SNSQSSSDSDSD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagccatggaggcaaccacccaagacaaaggtgtggtattgacattttgggca
caggacgacctcttaaaactgctggaggccatgaaactggccctgcctcagaaggacctg
accaaatacaaaacatcagagtcccaccttgactggacgaaggtggccttcaattccttc
acagcagagatgtgtaagcagaagtggtcagaggtctctaaagagattcgtaaattccgc
actctgacagaactgatatttgatgcccaggattatatcaagaacccatacaagggcaaa
aaactaaagaaacacccagatttccccaagaagcccttgactccatacttccgcttcttc
atggaaaagagggccaaatacgcaaaattgcaccctgagatgagcaacctagaccttact
aaaattctctctaagaagtacagagagcttcctgaaaaaaagaagaaaaagtatgttgaa
gactttttaagagacaaagaaacatttgtgcacagcatgtcgaagttcagagaactacac
ccggacctaatggaaagtatgacgaagaaaggttcaaatgcaccagaaaagcccaggaca
ccccaacagctgtggtacaaccacgaaaagaaggctgtcctcaagacacgcccggatgca
acaaccaaagacattaaggagagtcttggcaaacagtggacgcagctgtctgacaagaag
agactcaaatggattgccaaatccctagagcagcagaaactttacgaggagacaatgcgg
gggtacatccagcagcacccggagttaaacatcacccaaggggatatctccaagtccacc
ctgaccaaggcagagaggcacctgaaagacaaatctgagggccgacctgacaaacctcct
ccaaatggttactcgatgttctgtgcggagttgatgtcaagcatgaaggacgttcccagc
acggagcgcatggtgatgtgtagccagcggtggaagctgttgaaacagattgagaaggat
gcttaccagaaacgctgtgaacagaggaagaaggactttgaaatcgatatgcacgtattt
ctcagtagtttgtcagaggaggaacaaacccgagttttgtctgaggataaattaggcttt
aagagaggcggagccaacagtcctgcggcaaaaaagaaggcctccagagcaaaggccaat
ccagagaaacccaaaaggccaatttcagccatgttcatcttctctgaggagaagcgtccc
aaaatgcaacaggagcgtccggacgtttctgatagtgagatcacaagactcctggctcgc
atgtggaacgagctgcccgacaagaagaaggaaaaatataagcgcttagaaatggtcctg
aaggcagagtcggagaagaaggagaaagaggatcgtactcgactgcccgacccccccaag
actgctcaggacatctggcagcagagcgtcatcggagactacctggccagattcaagagt
gaccggccaaaggcacagaaagccatggaagcaacctggagcattatggagaaaaaagag
aaaatcatgtggatcaaaaaggctgcagaggaccagaaaagatacgagagagacctgtgt
gagatgcgctcacctgctgctaccatcgccgcagggaagaagatgaaatttgagggtgaa
cccaagaaaccaccatcaaacggctatcagaagttctctcaggagatgctgtccaacgga
gaactgaatcacctcccaatgaaagagcggatgacagagatcggcgcccgctggcagagg
tgtacactgaaggacaaagaccgctacaagaagatcgcagaggagaagcagaggcagtac
aaagtccttctggaacagtggcttggtagcttgtcttcacaagagagaaacacctacaaa
gaatataattcacaaaaaagaagaactacagcaaaaccaggaggccccaaggcaaaggct
aagaaatctgacacggaggaagaggacgatgaagaagatgagcgggaaaaggcttccact
gaggcatcctcatccagcgaggatgatgatgatgatgagaaggaggcggatgatgacgat
gaagatgacgacgacgaggcagaagataaggagaacaagtcagaggacagcagcagtgat
tcgaattcgcagtcgtcgtcggactctgattcggactga
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