Notothenia coriiceps (black rockcod): 104959825
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Entry
104959825 CDS
T04920
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD7-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104959825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104959825
03016 Transfer RNA biogenesis [BR:
ncc03016
]
104959825
Enzymes [BR:
ncc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104959825
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
104959825
Transfer RNA biogenesis [BR:
ncc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
104959825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
104959825
NCBI-ProteinID:
XP_010786036
UniProt:
A0A6I9PK43
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MDPRVAWIQPEQKGPANALWMHVWETSQGTRTLSSAQHQNYNQCVKYAALGVLKNVASSK
SSSSHQSITSTAISSLDLRLSNDNSTAEPEEKTLLQKRGISSTTALQEFRTPSSCERTMG
GNVTGNINSTNKNVGGANFLLHGMDNNVYQLPAFQQLCMKRHQVHPSVPENPTHNHHPGR
RKSDNKASTYGMNYLLSNCTNGNYTCTSWTPWKTRKYSPGVLGLHEEVIDFYNFMSPRPE
EAAMRKEVVNRIEMVIKELWPTANVQIFGSFSTGLYLPTSDIDLVVFGKWDRPPLQDLEQ
ALRKHNVAEPFSIKVLDKATVPIIKLTDQETEVKVDISFNVETGVKAASFIKGYVKNGIK
FNVKGFHNPPLVSNPVLVNRGHTHTHSHTQYHRNTWRRRKRESLPTKEMEERRRGVILNQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagggttgcttggattcagccggaacagaaaggacctgcgaacgccttatgg
atgcacgtctgggagacctctcagggaacacggaccctctcctccgcccagcaccagaat
tacaaccagtgtgtgaaatacgctgcgttgggggttttaaaaaatgtggcttctagcaag
agcagcagcagccatcagagcatcactagcactgcgatttcctccctggatttaaggctg
tccaacgacaactccaccgctgaaccagaggagaaaaccttgctacagaaaaggggaatc
tcgtccaccacggcgttgcaggagttccgcaccccttccagctgtgagaggactatgggt
ggaaatgtaacaggcaatattaatagtacaaataaaaacgtcgggggtgccaatttcctc
ctccacggcatggataataatgtctatcagctcccggctttccagcagctttgcatgaag
cgccatcaggttcacccctccgtacctgaaaaccccacacacaatcaccatccaggccgg
aggaaaagtgacaacaaagcgagcacttatgggatgaattacttgctttcaaactgcact
aatggcaattatacgtgcacttcttggacgccatggaagacgaggaagtacagccctggg
gtcctgggactccacgaggaggtgattgacttctacaacttcatgtctcctcgcccagag
gaagcagctatgaggaaggaggtggtgaaccggatagagatggtcatcaaggagctgtgg
cccactgcaaatgtccaaatatttggcagcttcagcacagggctgtaccttccaaccagt
gacattgacctggtggtgtttgggaagtgggatcgacccccgctgcaagacctggaacaa
gcccttcgcaaacataatgtggcagaacctttctccattaaagtgctggacaaagctacg
gtgccaatcatcaagctgacagaccaggagacggaggtgaaggtggacatcagcttcaat
gtggagactggtgtcaaggcggcgagtttcattaaaggttatgttaagaatggcatcaag
ttcaacgtgaagggcttccacaaccctccgctggtcagcaaccctgtgctggttaatcgc
ggacacacacacactcactctcacacacagtatcaccgcaacacgtggcggcgcaggaag
agggagagcctcccgacaaaggagatggaggagaggaggaggggggtcatcctgaaccaa
tga
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