Notothenia coriiceps (black rockcod): 104959843
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Entry
104959843 CDS
T04920
Name
(RefSeq) retinoic acid receptor gamma-A-like
KO
K08529
retinoic acid receptor gamma
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104959843
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncc03310
]
104959843
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104959843
Nuclear receptors [BR:
ncc03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
104959843
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
104959843
NCBI-ProteinID:
XP_010786056
UniProt:
A0A6I9PK66
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MFDCMEALGLAPRPLFDVSGQGSCMLSKASSYFSGLDPYAWAGTGSIQSVETQSTSSEEM
VPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQ
INKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPENYELSGELEELVKK
VSKAHQETFPSLGQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFT
TLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTELVF
AFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIYTRRRRPNK
PHMFPRMLMKVTDLRGISTKGTERVVTLKTEISGPMPPLIREMLENPEAFEDSSDSGDSA
AAAPPAIQAIKQEEKTTDESAVEEEEEEEEDDYWDEEKDRGADSDREPSGGEAAAAAGGG
PKKGVSGKTQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgcatggaggctctggggctggcccctcggcccctctttgatgtatccgga
caagggtcctgcatgctcagcaaggccagctcgtacttctcaggcctggacccctacgcc
tgggccgggaccggcagcattcagtcggtggagacccagagcaccagctcagaggagatg
gtgcccagctctccttcccctcctccccctcctcgcgtctacaaaccgtgcttcgtgtgc
caggacaagtcatctggttatcactacggagtgagctcctgcgagggctgcaagggtttc
tttaggcgaagtatccagaagaacatggtgtacacctgccaccgagacaagaactgccag
atcaacaaagtgacgcgcaaccgctgccagtactgtcgactgcagaagtgctttgaggtt
ggcatgtccaaagaagcggtgcgtaatgacaggaacaaaaagaagaaggacgtgaaggag
gaggtggtgctgccagagaactacgagctgagcggggaactggaagagctggttaaaaaa
gtcagcaaagctcaccaggaaaccttcccatctctgggccaactgggaaaatacactact
aattcgagtgccgaccacagagtgcagctggacttgggcctgtgggataagttcagtgag
ctgtccactaagtgcattataaagattgtggagtttgccaagcgactaccaggcttcacc
acgctcaccatcgctgaccagatcaccctcctcaaatctgcatgcctggatatcctgatg
ctgaggatatgcactcgctacaccccagaacaggacacaatgaccttctctgatggcctc
accctcaacaggacccagatgcataacgccggcttcggcccgctcacagagctggtgttt
gcctttgccggtcagctgctgcctttggagatggacgacacagaaacaggcctgctcagc
gccatctgcctcatctgcggagaccgcatggatctggaggagccccagaaggtcgacaag
ctgcaggagccactgctggaggctctgaagatctacacccgccgcagacgccccaacaag
cctcacatgtttccccgcatgctgatgaaagtcacagacctccgaggaatcagcaccaaa
ggtacagagcgagtcgtcaccctgaagacggagatctcgggccccatgcctcctctgatc
agagagatgttggagaaccccgaggccttcgaggacagcagcgactcgggggacagcgct
gcagccgccccccccgccattcaagccatcaaacaggaagagaaaaccacggatgagtct
gcagtcgaggaagaagaggaggaggaagaggacgactactgggacgaggagaaagacaga
ggggcggacagtgacagggagccgtcggggggggaggcggcggctgcggcgggggggggg
ccaaagaaaggcgtgagtgggaaaacgcagtga
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