Notothenia coriiceps (black rockcod): 104960033
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Entry
104960033 CDS
T04920
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
104960033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104960033
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
104960033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
104960033
NCBI-ProteinID:
XP_010786274
UniProt:
A0A6I9P6S6
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MEEMDFEQRRELRRQKREEMRLEAERLARNDDDEEEAARERRRRARQERMKGKDGEDTSG
QPDGLLVTNSHSVSETVSVSSSYGGGADDDELVLMDRMAKREERRLKRMKEALDKQNEMD
PAEGNNSSSVTMEKNNAEEERPSSTRRGRNRDNEDEEEKMESYSSRREQKEEEEEEEEAA
PEVADEGVDEEEEQKVELVEDKPRRSYMRDQESPEEPKMQNEAPTEEHSVVSEISNQVKS
TSSVTEENAVASEEAEEVPGDDYVDYSSENKSMCLRDVTDEDNEVSEILHSEDNEVNERG
RDREEQRKQNGGMHEEEAPKQHRKPERTQSRGSVRSPEASADDDQDDAARLEADAESEEF
EKMRQKQQQQEAEAELEDLKRKREERKKVLEEEEMQKKQEDAERKAREEEEKRKMKEEIE
RRRAEAAEKRQKVEDMDEEGRPFKCVSPRGSSLKIGERAEFLNKSAQKSSTVKASPSPLV
SKIDNRLEQYTSAAQRENKESRSPRSGAVDLPMVTDSIRSIKTMWEKGNAFGTPGNGGSP
FKEAAVMKTGVAGRINDWLNKTPESGKAAGGRPTDLKPVDVTNKRSLWENKGASPTKVGG
GGETKSIANGMGH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggactttgagcagcgccgggagctgaggaggcagaaacgagaggaaatg
cgcctggaggccgagcggttggcgagaaatgatgatgacgaggaggaggctgcccgcgag
aggaggcgcagggcacgccaggagaggatgaagggcaaggatggtgaagacaccagcgga
cagccagacggtctgctcgtgaccaacagccacagtgtgagcgagacggtgtctgtgagc
agctcttatggaggaggcgcagacgacgatgagctggtcctgatggaccgcatggccaaa
cgagaggagagacggctgaaacgcatgaaggaggcgctggacaaacagaacgagatggac
ccggcagagggtaacaacagcagcagcgtcaccatggagaaaaacaacgcagaggaggag
aggccatcctccacgcgcaggggtcgtaaccgtgacaatgaggatgaagaggagaagatg
gagtcgtacagctcaaggagagagcagaaggaggaagaagaggaggaggaggaggctgct
cctgaggtggcagatgaaggtgtggatgaagaggaggagcagaaagtggagctggtggag
gataaaccaaggaggtcctacatgagagaccaagaatcacctgaagaacctaaaatgcaa
aacgaggcacccactgaagaacattcagtagtcagtgagatttcaaaccaggtcaagtca
acaagttcagtgactgaggagaatgcagtagcatcagaggaggctgaggaggtacctggg
gatgattatgtagattattcatcggagaataagtccatgtgtctcagagatgtcactgac
gaggacaatgaggtctctgagatactgcattcagaggataatgaggtgaatgagagagga
agggacagggaggagcagaggaagcagaacggaggaatgcacgaggaggaggctcccaaa
cagcacaggaaacctgagaggacccagagccgtggcagtgtgcgttcccccgaggcgtcc
gccgacgacgaccaggacgacgccgcccgcctggaggccgacgccgagagcgaggagttc
gagaagatgaggcagaagcagcagcagcaggaggccgaagccgagctggaggacctgaag
aggaagagggaggagaggaagaaggtgctggaggaggaggagatgcagaagaagcaagag
gacgccgagagaaaagccagagaggaggaggagaagcggaagatgaaggaggagattgag
aggaggagagccgaggcagctgagaagaggcagaaggtggaggacatggacgaagagggc
cggcctttcaagtgcgtcagccctcgaggctcctctctgaagattggagagagggcagag
ttcctgaacaaatctgcacagaagagcagcacagtgaaggcgtctccttctcctctggtg
tccaagatagacaacaggctggagcagtacacctctgctgctcagagagagaacaaggaa
tcccggtcccctcgctccggagccgtggatctccccatggtgaccgacagcatccggagc
atcaagaccatgtgggagaagggcaacgcgttcggcacacctggaaacgggggaagcccg
ttcaaggaagcagctgtgatgaagacaggcgtggcgggtcgcattaacgactggctgaat
aaaaccccggagagcggcaaagcggcaggaggaaggccaacggacctgaagcctgtggac
gtcaccaacaagaggagtctatgggaaaacaaaggtgcctctccaaccaaggtgggaggc
ggaggggagaccaaatcaatcgccaacggtatgggacactaa
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