Notothenia coriiceps (black rockcod): 104960047
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Entry
104960047 CDS
T04920
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ncc03012
]
104960047 (dhx57)
Enzymes [BR:
ncc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104960047 (dhx57)
Translation factors [BR:
ncc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104960047 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
Cas3-like_C_2
GyrB_insert
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
104960047
NCBI-ProteinID:
XP_010786295
UniProt:
A0A6I9PEX7
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MTTAIKSALSLNPTPLLSRPQWRKRREKEERRVKEGAGIYERVIDPPQMEITPGSGVWLG
QHSHKHGLFKPIVPPPSTSSSLIPSRIKASRRSFFWRKCLVLKDAAPSSSSSARCSESFY
TPCGEGSTQKCLSAAETDDTKKSVLKNIAAMDLDKINMDLVESLLEWIVDGNHNYPQGAV
LVFLPGLAEIKTLYEQLKSNRMFNNRGKSRCEVYPLHSTLSNEEQQAVFRRPPEGVTKII
ISTNIAETSVTIDDVVYVIDSGKMKEKRYDATKSMESLEDSWVSRANALQRKGRAGRVAS
GVCFHLFTSHCFQHQLAEQQLPEIQRVPLEQLCLRIKILDLFADRMLESVFTRLIEPPAM
ESLDAAKQRLRDLGALTDDEKLTPLGYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAAS
LAFKSPFVSPWDKREEANEKKVAFTVASSDHLALVQAYKGWCCAAKNGHQAGFLYCRENF
LSSRGLQEIASLKRQFAELLSDIGFIKEGLRARTIERMSSKGTDGVLEATGHEANLNSDN
IKLMSAMLCAALYPNVVQVRSPQGSYKMTSKGAMMMQPKAHELRFMTKNDGAVHIHPSSV
NYAVRHYNSPYLVYHEKVKTSRVFIRDCSMVSVYPLVLFGGGQVHMELHKGEFVISLDDG
WIRFAASSHQVAELVKELRWELDQLLEDKIRSPSMDLCTCPRGSRIIGMIVQLVTTQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagccatcaagtcagccctgtctctaaatcccacccccttactgagcaggcca
cagtggaggaaaagaagggagaaagaagagaggagagtaaaagagggggcagggatttat
gagcgggtgatagaccccccccagatggagatcactccgggcagtggagtgtggctcggc
cagcacagccacaagcacggcctgttcaagcccattgttcctcctccctctacctcttcc
tccctcatcccctctcgcatcaaggcttcaaggagatccttcttctggaggaaatgtctg
gtcttgaaagacgcagctccttcatcgagttcatctgctcggtgctcagagtctttctac
actccttgtggggagggaagcactcaaaagtgtttgtcagcagcagagacagatgacact
aagaagtctgtactgaagaatattgctgcgatggacctggacaagatcaacatggacctg
gtggagagcctgctggagtggattgtagatggaaatcacaactaccctcaaggtgcagtg
ctagtgtttttgccaggcctggctgagatcaagacgctgtacgagcagctcaagtccaac
agaatgttcaacaacaggggcaagtccagatgtgaagtgtacccactccactcaaccttg
tccaatgaggagcagcaggcagttttccgccgacccccagagggagtcacaaaaattatc
atctccaccaacatcgctgagacctcggtaaccattgacgacgttgtatatgtcatcgac
tccggcaagatgaaggagaaaagatacgatgcgactaaaagcatggagagcctggaggac
tcgtgggtgtctcgggccaacgctctgcagaggaagggtcgagcggggcgcgtggcctcg
ggggtctgcttccacctcttcaccagccactgcttccaacaccagctggctgagcagcag
ctgcctgagatccagagagtgcctctagagcagctctgcctccgaatcaaaatcctggac
ttgtttgctgatcggatgctggagtccgtcttcactcggctcatcgagcccccggctatg
gagagcttagacgcagccaagcagcgcctgcgggacctcggggccctcactgacgatgag
aaactgaccccgctgggctaccacctggcctgcctgcccgtcgacgtgcgcatcgggaaa
ctcatgctgttcggggccatcttccgctgcctcgaccctgcactcactatcgctgccagt
ctggccttcaaatcgccctttgtgtctccatgggataagcgagaagaagccaatgagaag
aaagtggcctttaccgtggcgagtagtgaccatctagctctggtgcaggcatacaaggga
tggtgctgcgctgctaagaatggccaccaggccggcttcctctactgcagggagaacttc
ctgtcttcacgaggcttacaggagatcgccagtctgaagaggcagtttgctgagctgctg
tctgacatcggcttcatcaaggagggactgagggccaggacaatcgagcgcatgagctct
aaaggcactgatggcgttctggaggccaccggccacgaggctaacttgaactcagacaac
atcaagctgatgtccgccatgctctgcgctgcgctctatcccaatgtggtccaggtacga
tctcctcaggggagttacaagatgacgagcaaaggagcgatgatgatgcagcccaaagcc
cacgagctccgcttcatgacgaagaacgacggcgccgtccacatccacccgtcgtctgtc
aactacgcggttcgccactacaacagcccgtacctggtttaccacgagaaggtgaagacg
agccgagtcttcatcagggactgcagcatggtgtctgtgtacccgctggtgctgttcgga
ggcgggcaggtccacatggagctgcacaagggagagtttgtcatctccctcgacgacggg
tggatccgatttgccgcctcttctcatcaggtggctgagctggtgaaggagctgcgctgg
gagctggaccagctactggaggacaagatcaggagccccagcatggacctgtgcacgtgt
ccccgcggctcccgcatcatcggcatgatcgtccagctcgtcaccacacagtag
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