Notothenia coriiceps (black rockcod): 104960182
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Entry
104960182 CDS
T04920
Symbol
abca3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104960182 (abca3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104960182 (abca3)
Transporters [BR:
ncc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104960182 (abca3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_23
RsgA_GTPase
AAA_22
AAA_29
Slo-like_RCK
Motif
Other DBs
NCBI-GeneID:
104960182
NCBI-ProteinID:
XP_010786460
UniProt:
A0A6I9PFF0
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MAIARQFGLLLWKNYLQKKRQILVTVVEILLPLLFSCILIVLRQKVPFKDYPNATVYGSF
DVNQLPGGLNKQFQLAYVPGNSSVVRQVAEDVRSSLLFSAVRGFETEEQFEEYVRSDPKS
GKLLAAVVFEHPFTHDDEPLPLKVSYHLRLSFSPRNAPAQEKFELNPNSDLDWHTLSLFP
LFQLPGPREQYDKDGGTPGYRREGFLAVQHAVDRAIMRSFNRTSASSLLRQTRVVLSRFP
YPAFIYDVFILAIQNQLPLILVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWLHWS
AWFLMFSLFLSISIFLVTLLLCIHMSPNGAVLTYSDPTLVFVFLLFFTVATINFSFMISA
FFSQANVAAAAGGFIYFLSYLPYLFLWPRYDLMSHAQKVSACLISNVAMSMGAQLIGMFE
GKGTGIQWSNLFDSVTVDDDFSMGQVLCLLLFDSVIYGLVAWYMEAVFPGEYGVPLPSYF
FLLPSYWCSSPRMALVNEKEEEEDAEKALKGEFIEEEPSGLVSGIKIKHLAKEFTMGNKT
RQAVRDLTLNMFEGQITVLLGHNGAGKSTTLSMLTGLYPPTSGRAYINGYDICQDMALIR
RSLGLCTPLKGFSRDKIPDEVDRTIRILNLEDKRHARSKTLSGGMKRKLSIGIALIGDSK
VVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDEADLLGDRIAIMAGGELQCC
GSPLFLKNKYGAGYHMVIVKDALCNVSEITRIVHMYVPNATLESSAGAELSFILPKESTS
RFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKLVDSSLDIQAIQLPALQYQHERR
SNDWTADDASSTSGMTDVTDFTDSGTLISEDCSNIKLNTGARLHIQQFYAMFLKRALYSW
RNWKVMVAQFLVPLVFTILALVVARSLPNHNKAPQLRLALSQYGPTRVPVALPPGMGPVA
SALANTYSSQLSAQLGKLVNITDFTDYVLTQAEEEGGSFNERCVVGAAFRGSSSKYTEVT
AYFNNAGYHTSAAALMLVDNALFKHLAGPNASIQTGNYPMPRNMSETAQSQLREGRTGFI
IAINLMYGMASLSSTFALLLVTESSIKSKHVQQVSGVYLSNFWFSALLWDLINFLLPCLL
MLVVFQAFGVKAFTDNCHLVDVLLLLLLYGWAVVPLMYLLSFLFSSAATAYTRLTIFNII
SGTATFLSVTILAIPELHMKHLSYLLDKVFLIFPNYCLGMSFSQFYQNYEFITFCNSSPP
FSLMACEILNITFQPNYFSMSEPGVGRFVVAFAIQGLVFIILLFVIEMQCVRTLRRFVTS
LFRRHKQFAHTEDAALLPEDRDVAEERKRVLECQPVVESMVGSPLVMQELSKVYSSGSTL
LAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDETVTSGDAYIDGYSILRDIKKVQQ
RIGYCPQFDAVLDHMTGRETLSMYSRLRGIPERYVSGCVENVLRSLLLEPHADKLVRSYS
GGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVTRTRESGKAIIITSHSMEE
CEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHIEAELEDSDLQLFKDFIEST
FPGSQLKDEHQGMVHYHLTDKTLSWAQVFGTLEAAKEKYQIEDYCVSQISLEQVFLSFAQ
FQHCIECGKNFQRNMGLCLRYTSEPIK
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgcgcgacaatttggacttctgttgtggaaaaattatcttcagaagaaacgt
cagatcctagtaaccgtggtggagatcctgctgccgctgctcttctcctgcatcctcatt
gtgctacgtcagaaggtgccttttaaggactacccaaatgccacagtctatgggagcttc
gacgttaaccaactaccagggggcttgaataaacagtttcagctggcctatgtgcccggt
aactccagtgtggtgcgtcaggtggcagaggacgtgcgaagcagccttctcttctccgca
gtgcgtggcttcgagacagaagagcagtttgaggagtatgtgagaagtgaccctaagtca
gggaagctgctggctgctgtggtgtttgagcatccattcacccacgatgatgaacctctg
cccctgaaggtgagctaccacctgcgtttgagcttctccccacgtaacgcccctgcccag
gagaagtttgagctgaaccccaacagcgatctggactggcacacgctcagcctcttcccc
ctcttccaactgcctgggccgagggagcagtacgacaaggatgggggcacgcctgggtat
cgtcgagagggattccttgctgtacagcacgcagtggaccgagccatcatgcgctctttc
aacagaacgtctgcttcctctctgctgcgacagaccagagtggtcctgtcacggtttcct
tacccggcctttatttacgacgtcttcatcctggccattcagaaccagctgcccctaata
ctggtgctcagcttcacctacacctcgctcaacatcgtgcgagccgtggtgcaggagaag
gagaggaagctcaaggagtacatgaggatgatgggcctcagcaactggctccactggagc
gcctggttcctcatgttctccctcttcctctccatttcaatctttctcgtcaccctactc
ctttgtatccatatgagccctaatggagcagtgctgacctacagtgaccctacgctggtc
tttgtcttcctgctcttcttcactgtggccaccatcaacttcagcttcatgatcagtgcc
ttcttctcacaagcgaatgtggcggcagcagcgggcggcttcatctatttcctgagctac
ctgccttatttgttcctgtggccacgctacgacctgatgagccatgcccaaaaagtgtca
gcctgcctcatctccaacgtggccatgtctatgggagctcagctcataggaatgtttgaa
ggcaaaggaacgggaatccagtggtcaaacttgttcgactcggtgactgtggacgatgac
ttctccatgggccaggtgttgtgtttgctgctgtttgactctgtgatctatgggttggtg
gcctggtacatggaggccgtttttccaggagagtacggagtgcctcttccatcttacttc
ttcctcctgccttcatactggtgcagcagcccccgcatggctctagtgaatgagaaagag
gaagaggaggatgcagagaaggctctgaaaggagagtttatagaggaggagccatcggga
cttgtctcggggatcaagataaaacacctcgctaaggaattcacgatgggaaacaagaca
cggcaggctgtacgggatctgacgttaaacatgttcgagggacagatcacggtgctgctc
ggacacaacggtgctgggaagtccacgacactgtccatgctgacaggactgtatcctccc
accagcggcagagcctatatcaacggctacgacatctgccaggacatggctctgatccgc
cgcagcctcggactctgtacacctctgaaaggcttctccagagacaagattccagacgag
gtagaccgcaccatccgtatcctgaacctcgaagataagcgccacgctcgctcaaagacc
ctctccggtggcatgaagagaaagctctccattggtattgccctcattggagactccaag
gtggtcatgttggacgagcccacatcaggtatggatccgtcagctcgacgcgccacctgg
gacctcctgcagggggagaagaggggtcgcaccatcctgctcaccacacacttcatggac
gaggctgacctgctcggcgaccgcatcgccatcatggcaggaggagagctgcagtgctgc
gggtcaccactattccttaagaacaaatatggtgctggctaccacatggttatagtaaag
gacgccctttgtaacgtgtctgagatcacccgcatcgtccacatgtacgttcctaacgcc
acgctggagagcagtgcgggcgccgagctctctttcatcttgcccaaagaaagcaccagc
aggtttgagctgctgtttgctgagctggagatgaacagagaagagctgggcatcgccagc
tacggagcttcagtaaccactatggaagaggttttcctcagagtgggaaagttagtggat
tctagtttggacatccaggccatccagctgccagcgctacagtaccaacacgagagacgc
tccaatgactggaccgccgatgacgccagcagcaccagcggcatgacggatgtcactgac
ttcactgacagcggcacgctcatctcagaggactgctccaacatcaagctgaacaccggg
gccagactacacattcaacagttctacgccatgttcttaaagagggcgctgtacagctgg
agaaactggaaggtgatggtggctcagttcctggtccctttagtcttcaccattttggcc
ttagttgtggcacgcagcttgccaaatcacaacaaggcccctcagctgaggctggccctc
agtcagtacggccccaccagggttcctgtagccctgccgccagggatgggccccgtggcc
tctgccctggcaaacacatacagctcacagctctctgcccagcttggaaagctcgtcaac
atcacagacttcacagattacgtcctgacccaggcagaggaagaaggcggcagctttaat
gagcgctgtgtggtgggtgcggctttccgtggcagcagcagcaaatatacagaagtgacg
gcctatttcaacaacgcaggctaccatacatccgccgcagccctcatgttggtggacaat
gctctgttcaagcatctagcaggacccaatgcttccatccagacgggaaactacccaatg
ccacgcaacatgtctgagaccgcccagagccagctcagagagggaagaaccggtttcatc
attgccatcaacctgatgtacggtatggcctccctgtccagcacgtttgccctacttctc
gtaacagagtcctctatcaagtccaagcatgtacagcaggtcagcggtgtctacctgtca
aacttctggttctctgccctgctgtgggacctgatcaacttcctgctgccctgccttctc
atgctggtggtttttcaggcattcggagtcaaggctttcacggacaactgccacctggta
gatgtgttgttgttactgctgctgtatggctgggctgttgtgcctcttatgtacctgctc
agcttcctcttctccagtgcagctactgcctacacccgcctcaccatcttcaacattatc
tctggcacggccacctttctgtctgtcaccattttggccatcccagagttacatatgaag
cacctgtcttacttgctggataaggttttcctgatcttcccaaactattgcctgggcatg
tccttcagccagttctaccagaactacgaattcatcacgttctgcaactccagtccacca
ttcagcctgatggcgtgtgaaatattgaacattaccttccagccaaactatttctcgatg
agtgaacctggtgtgggacgcttcgtcgtggccttcgcgatacagggtttagtcttcatt
attctgctgtttgtcatcgagatgcagtgtgtccgaactctccggcgattcgtcacctcc
ctgttcagaagacataaacagttcgctcatacagaggatgcagctctgcttccggaggac
agggatgtggctgaagagagaaagagggtcctggagtgtcagccggtggtagagtctatg
gtcggcagccccctcgtaatgcaggagctcagcaaggtgtacagcagcgggtcgactctt
ctcgctgtggaccggctgtctttagctgtggggaaaggggagtgtttcggcctcttgggc
ttcaatggagcaggcaagaccacgacttttaagatgctgactggtgatgagactgtgacc
tctggggatgcctacattgatggatacagcatcttgagggacattaaaaaggtgcagcag
cgcattggttactgtcctcagtttgacgccgtgttggaccacatgacaggaagagaaact
ctgagtatgtattcaaggctcagaggaataccagagaggtatgtgtccggctgcgtggag
aatgtcctgaggtcgctgctgctggagcctcatgctgacaaactggtccgcagctacagt
ggaggtaacaagaggaagctgagtgcaggcatggctctcattggtgggcctccggtcatc
ttcctggacgagccttcgacagggatggaccccgtggccaggaggctgctgtgggacgct
gtgacacgcacacgggagtctggaaaggccatcatcatcacgtctcatagtatggaggag
tgtgaggctctgtgcacccggctggcagtgatggtcaacgggcagttcaagtgcctcggg
agtccccagcatctgaagagcaaattcggcagtggctacaccctgctggccaaagtacac
atcgaggctgagctggaggacagcgacctgcagctttttaaagactttattgaaagtacc
ttcccaggaagtcaactaaaggatgagcaccagggaatggtgcactatcatttgacagac
aaaacactatcctgggcacaggtgtttggcactttggaggcagccaaagagaagtatcag
attgaagactactgtgtgagccagatatcactggagcaggtgttccttagctttgcccag
tttcagcactgcatagagtgtgggaagaactttcaaagaaatatgggtctgtgtttacgg
tatacttcggaaccaataaagtag
DBGET
integrated database retrieval system
