Notothenia coriiceps (black rockcod): 104960295
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Entry
104960295 CDS
T04920
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104960295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104960295
03016 Transfer RNA biogenesis [BR:
ncc03016
]
104960295
03012 Translation factors [BR:
ncc03012
]
104960295
04131 Membrane trafficking [BR:
ncc04131
]
104960295
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncc04147
]
104960295
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104960295
Transfer RNA biogenesis [BR:
ncc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
104960295
Translation factors [BR:
ncc03012
]
Eukaryotic type
Elongation factors
104960295
Membrane trafficking [BR:
ncc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
104960295
Exosome [BR:
ncc04147
]
Exosomal proteins
Proteins found in most exosomes
104960295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
G-alpha
Motif
Other DBs
NCBI-GeneID:
104960295
NCBI-ProteinID:
XP_010786582
UniProt:
A0A6I9PEG8
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MGKEKQHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETNKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPVSGWNGDNMLEASPNMTWFKGWKVNRKDGNASGTTLLEALDAIQSPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALN
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKSDPPLEAANFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAYSTGKVTKSAQKAQRNK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaaacaacacatcaatatcgtcgtgatcggccatgtggactcaggcaag
tccaccaccacgggccacctcatctacaagtgtggaggcatcgacaagagaactatcgag
aagtttgaaaaagaggcggctgagatggggaaggggtcgttcaagtacgcctgggtgctg
gacaagctgaaggcagaaagggagcgtggaattaccatcgacatttcgctgtggaagttt
gaaaccaacaagtactatgtgaccatcatcgatgccccgggtcatagggacttcatcaag
aacatgatcaccgggacctcccaggcagactgtgctgtgctgattgtggcggccggtgtg
ggagagttcgaggccggtatctctaagaacggacagacccgtgaacatgcccttctggcc
tatactctgggagtgaagcagctcattgtaggcgtcaacaagatggactccaccgagcca
aactacagccaaaagcgctatgaggaaatcgtgaaggaagtgagcacctacatcaagaag
atcggctacaatccggacaccgtggcctttgtacccgtttcaggctggaacggagacaac
atgcttgaggccagccccaatatgacatggtttaaggggtggaaggtcaataggaaagat
ggcaatgcttcagggaccacactcctggaggctctggatgccatccagtcgccgagccgt
ccaacagacaaacctctgcgtctgcctctgcaggacgtctacaagataggaggtattgga
actgtgcctgttggccgtgtggagaccgggatactaaagcctggcatggtggtgaccttt
gcccccgtcaatgtgactactgaggtgaagtctgtggagatgcaccatgaggcgctgaat
gaggccctgcccggagacaacgtgggcttcaacgtcaagaacgtgtcggtcaaggacatt
cgccgtggaaatgtggccggcgatagcaagagcgaccccccgctggaagctgccaacttc
actgctcaggtgattatcctcaatcacccgggccagatcagtgccggttacgctcctgtg
ctcgactgtcacactgctcacatcgcctgcaagtttgcagagctcaaggaaaagattgat
cgccgctctggcaagaagcttgaggacaaccccaaattcctcaagtctggagatgctgcc
attgtggatatggttcccggcaagccaatgtgtgttgagagcttctccgagtaccctcca
cttggccgctttgcagtgcgggacatgcgtcagactgtggccgtcggagtgattaaaggt
gtggagaagaaggcctattccactggtaaagttaccaagtccgcccagaaggcccagagg
aacaaatga
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