Notothenia coriiceps (black rockcod): 104960454
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Entry
104960454 CDS
T04920
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104960454 (tmc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104960454 (tmc4)
03037 Cilium and associated proteins [BR:
ncc03037
]
104960454 (tmc4)
Transporters [BR:
ncc02000
]
Other transporters
Pores ion channels [TC:
1
]
104960454 (tmc4)
Cilium and associated proteins [BR:
ncc03037
]
Other cilia and associated proteins
Stereociliary proteins
104960454 (tmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
104960454
NCBI-ProteinID:
XP_010786816
UniProt:
A0A6I9PMM0
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSSEPQRPGSREVLDYTEEYGYHSDQHSLRLRRGPSRVSNQNPPQFDWSSPHEEEDEESS
SGPPRDLRATPLPMALKRAIRQVQQMQVPVVSSRDSWKRKKAKSLRKLKDCGMGFLSFFS
LWNKTLQKIGGNFGGGVQSYFLFLRFLVVLNFVSFLLIAGFVLVPSIVFRSVGAALVNST
GHGACMVYDPNPEGLVVFYNYFLDLLSGTGFMEYSYLFYGYYNNTMVEDKNFSYNIPLAY
LFTAVFYFVFCLICIIARMGTAARVVVATGSSTVGDYSMIVFTSWDYGCLGDRATKLKQK
NIHYQLQVDLEEESIKKRAAALTLSQKIVLYSLRVSMCLVSFGLIIAAFYGIFAATEFSQ
VKSGQGGILGLFFEYLPSIVITAGNFVVPLLCDQIALIERYSPSTTVIVALLRSVFLRLV
SLGVLLFTLWRQITCEGAENTGECKLCQYNHALYPCWETRVGQEMYKLTLFDFLINIAVL
FLVEFPRRMVVDNWSNKLAQWVGRQEFVVPANVLGLVYGQTVVWTGALFCPLLPLINTLK
FILLFYFMKITLFHNCRPALKTFRSTTSTFFFLVVLLFGLGLGTVVMIYSLSEIRPSMSC
GPFRFFPSMWSIVPTSFNNLSIVTQEFLFFIGSQSFSIPLFALSCVVMCYFVALASVYGK
SVALLRAQIKLEGRDKQFLVKQIEMLSGRQQILKQTAGASS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgaaccacagagaccaggctccagagaggtgcttgactatactgaagagtat
ggttaccacagtgaccagcattcactaaggttaagacggggtccgtctcgagtgtccaat
cagaatccgcctcagttcgactggagctcgccccacgaagaggaggatgaggagagcagc
agtggaccgcctcgagacctcagagccactcctctgcccatggctctgaaacgagctata
aggcaggtgcagcaaatgcaggtacctgtggtttccagcagggattcgtggaaacggaaa
aaggccaaatctctgcgtaaactcaaagattgcggcatgggattcctctcctttttctct
ctgtggaacaagactttgcaaaagatcggagggaacttcggaggtggtgtccagtcctac
ttcctgttcctgcggttcttggtggtgctcaattttgtttcctttttactgattgctgga
tttgtcctcgtccccagcatcgtcttcagatccgtcggggccgcacttgttaacagcaca
ggtcacggggcatgcatggtttatgatcctaatcctgaaggcctggtggtgttctataat
tacttccttgacttactttcaggaacgggtttcatggagtattcatacctgttttatggc
tactacaacaacacaatggtggaggacaagaacttctcctacaacatcccgctggcctac
ctcttcaccgctgtcttctactttgtcttctgcctcatttgtatcatagcgaggatgggg
actgctgctcgagttgtcgtggcaacgggaagcagcaccgtgggcgactacagcatgatc
gtgttcaccagctgggactacggttgcctgggagaccgagctaccaaactgaagcagaag
aacatccactaccagctgcaggtggatctggaggaggagagcataaagaaaagggcagcc
gctctgactttgtctcagaaaattgtcttatactctctacgtgtttctatgtgtttggtt
tcatttgggctcattatagcagccttctatggcatctttgcggccaccgagttcagccag
gtaaagagtgggcagggagggatcctgggtttgttctttgagtatctgccttccatcgtc
atcaccgccggaaactttgtggtgccgctgctgtgtgaccagatcgccctgatagagcga
tactcccccagcactaccgtcatagtggcactgttacggtcagtgtttcttcggctggtg
agtctgggtgttctcctcttcaccctgtggcgtcagatcacctgcgaaggggctgaaaat
actggagaatgtaaactctgccaatacaaccatgcactttacccgtgctgggaaacgcgt
gtaggacaggagatgtataagctgactctgtttgacttcctcatcaacatcgctgtgctc
ttcctagtggagtttccacgcaggatggtggtggacaactggtccaataagctggctcag
tgggtgggtcgacaggagtttgtggttcccgccaacgtgctcggactggtttatggtcag
actgtggtttggactggagctctattttgccctttgctgccgctcatcaacaccctcaag
tttatcctcctcttctacttcatgaagattacactcttccataattgtcggccagcactg
aagacgtttcgctccaccacctccaccttcttcttcctggtggtgctcctgtttggcttg
ggcctgggcacagttgtcatgatatacagtctatctgagatccgtccttcaatgagttgc
ggccctttccgtttttttcccagcatgtggtcgattgtgccaacatctttcaacaacctc
tccatcgttacacaggagtttctcttcttcatcggttcccagtcattctccatccccctg
tttgcattatcttgtgtggtgatgtgctattttgtggccttagcctccgtctatggaaaa
agtgttgccttgctaagagctcagattaaactggagggccgtgacaagcagttcttggtg
aagcagattgaaatgctgagtggacgacagcagatactaaaacagacagcaggagcatct
agctga
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integrated database retrieval system
