Notothenia coriiceps (black rockcod): 104960457
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Entry
104960457 CDS
T04920
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104960457 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104960457 (prpf31)
Spliceosome [BR:
ncc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104960457 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
7TM_GPCR_Sra
Motif
Other DBs
NCBI-GeneID:
104960457
NCBI-ProteinID:
XP_010786822
UniProt:
A0A6I9P878
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSLADELLADLEEAGDEGEEGLYPEEEERDSDGEATQGRAEGALEDIPEEMEVDYSKAES
VGSIAKLRNSKQFSEIMEKISFYSGKQRKNSEISGLVESDPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYVRTVKELGNNLEKCKTNETLQTILTNATIMVV
SVTASTTQGILLSDDELQQLEESCDMSLELSQSKLRIYEYVESKMSFIAPNLSVIVGAST
AAKIMGIGGGLANLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARLVSAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKMVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGISSSVAFTPLQGLEIVNPGA
AEKKVAEANQKYFSNMAEFLKVKKESKM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggacgagctcctggccgatttggaggaggccggcgatgagggggaggag
gggttgtatcctgaggaagaggaacgggatagtgatggagaggcaacgcagggaagggca
gaaggagcgttggaagacatcccagaggagatggaggtcgactacagtaaagcggagagt
gttggctccatcgccaagctgcgcaatagcaagcagttttcagagatcatggagaaaatt
tcattttatagtggaaagcagcgcaagaactcagagatctctggtctagtggagtccgac
ccagagtacagactgatcgttgcagccaataatctcacagtggagatcgacaacgagctc
aacatcattcacaagttcactcgggacaaatactccaagaggtttccagagctcgagtct
ctcgtgccagattctctagattacgtccgcacagtcaaggaattgggaaataatctggag
aagtgcaagaccaatgaaactctgcagacaatcctcaccaacgccactatcatggtggtc
agtgtcacagcctcgaccacacagggaatactccttagtgacgatgaactgcagcaactg
gaggaatcttgtgacatgtctctggagctgagccagtccaaactcaggatctatgaatat
gtggagtccaaaatgtcattcatcgccccaaatctgtccgtcattgtcggagcgtcaaca
gctgccaagatcatgggtattggaggcggcctcgctaacctctccaagatgcccgcctgt
aacctgatgctgctgggcgctcagaggaggacgctgtctggcttcagcagcacctccctg
ctgccacacaccggctacatctaccactgtgacgtggtgcagtcactgccacccgacctc
aggaggaaggccgctcgcctggtgtctgctaaatgcaccctggcttcccgagtggacagc
ttccacgagagttcagacggcaaggttggctacgatctcaaagaagagatagagaggaag
tttgataaatggcaggagcctccgccagtgaagatggtcaaaccgctgccagccccgctg
gacggacagaggaagaagagaggaggaaggaggtatcgaaagatgaaggagcgtctcgga
ctgactgagatcaggaagcatgcaaacaggatgacctttgcagagattgaggatgatgcc
taccaagaggacctgggcttcagtctgggtcagttggggaagagcggcagcgggcgagtc
cggcaggctcaggtcaacgaggccaccaaggccaggatctccaaatccctccagaggacg
ttgcagaagcagagcatgacgtacggaggaaagtccaccgtcagagaccgctcctcaggg
atcagctccagtgtggcgttcactcctctccaggggctggagatcgtgaacccaggggct
gcggagaagaaggtggctgaagcaaaccagaagtacttctctaacatggcggagttcctc
aaagtcaagaaggaatcaaagatgtga
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