Notothenia coriiceps (black rockcod): 104960521
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Entry
104960521 CDS
T04920
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104960521
04990 Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
104960521
Cell adhesion molecules [BR:
ncc04515
]
Immunoglobulin superfamily
SALM family
104960521
Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
104960521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
Ig_2
fn3
LRR_9
LRRCT
Motif
Other DBs
NCBI-GeneID:
104960521
NCBI-ProteinID:
XP_010786904
UniProt:
A0A6I9P8F3
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MPVPPPLNPCRQKHLPHTHPHPEQRAEHSPSLFPPSIPSLSFLPALLVSSLPSSSQLVHC
ACPRAPKRTLPESAPFPAFHWLSLVTCCLLPSLIGAGETWGMVSTCPFHCVCRNLSESLS
TLCADKGLLFVPVNVDRRTVELRLADNYITEVGGIDFANMSGLVDLTLSRNTINLIRPMT
FGDLESLRSLHLDGNRLIAVGPRDLAGLVNLQHLIINNNQLIKVSVQAFDDFLLTLEDLD
MSYNNLRRVPWESIQNMASLHTLNLDHNLIDFIAEGVFGELYKLARLDMTSNRLRTLPPD
PLFARSQTGAISPTPYNAITSLNFGGNPLHCNCELLWLRRLIRGDDMETCATPPHLAGRY
FWSIPEEEFTCEPPLITRHTHKLWVLEGQRATLKCRAIGDPEPVIHWVSPDDRIVANSSR
TSSFSNGTLDILVTVARDDGAYTCIAINAAGEATATVDLKIIPLPHRGGAGGNAGNNNVN
TKNTGNVTNGILRTDPGSSDISTGINGGINNGAGRGGEAEDGKKDDEGESSKASEGETAN
GGSMEDEEEEEERRVGVQGVTSTSAQVRWDLGSLSAVYAVWMYQIQYNCTADETLIYRIL
PSTSDRFLLKNLVSGADYNLCVLAIFDDTITSLAATKVLGCATFSTKDVYPACRSLHAHF
LGGTLTILVGGVVVVTLLVFTVALMVRHRVCNHGDHMICHSGNTEAGGGACCQGGGAGDK
GGNSGGCYQSNGSGDVMMVVLPNGLPSKRGGEKDKEKDKDKEKEKEKEEADAASSLLPKP
PPKPRPKPKVNLEQFLSAGGVVSTTTGASEMALVVRQRKLDKAPPYTAESDRTPLYYSPS
STLPRLSHSRDRPRPRLERELTTRASFSLAAPLGDSDLLDWRMSSRSRDKWNSSQAYQSP
LSPLSPACGTVSKRRHSLDMGSSVALATADAAATVAKRYVAGNYAKRLSVIWTRRSQSLH
GMLVQCGSTTSTTSSTTSDEESGVGYGAHCEFQRGYIHAYNTTNSNSNTGITAGKAIKDM
GRLTGKDGRSAEELEESVV
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccccccacccctcaatccctgcagacaaaaacacctgccccacacacacccc
catcccgaacaaagggcagaacactccccttccctcttccctccatccatcccctctctt
tcttttctccccgctctcctcgtctcatctttgccctcctcatcccagctcgtccactgc
gcgtgccccagggctccgaaaagaacacttcctgaatcggcccctttcccggcgttccac
tggctgtctctggtcacatgctgcctgctgccttcgctgattggagcaggggagacgtgg
ggcatggtctcgacctgtcccttccactgcgtgtgccgaaacctttccgagtcgctcagc
acgctctgcgccgacaagggcctcctttttgtccccgtgaacgttgaccggcgcactgtg
gagctgcgactggccgacaactacatcacggaagtgggcgggattgactttgccaacatg
agcggattggtggatttgactctgtcgaggaataccatcaacctgatccgacccatgacc
tttggtgacctcgagagtctgcgctcactgcatctggacggtaatcgcttgatagcagtg
ggacccagggaccttgcagggttggtcaatctgcagcacctgatcatcaataacaaccaa
ctgatcaaagtctccgtccaggccttcgacgacttcctgctcacactggaagacctcgac
atgtcctacaacaacctcaggagggtgccgtgggagtccattcagaacatggccagtctg
cacactctcaatctggaccataacctgatagacttcatagcggagggagtctttggagag
ctgtacaagcttgcaaggctggatatgacctccaacaggctccgcactctgcctccagat
cccctattcgcaaggtcccagacaggtgcaataagtcccaccccgtacaatgctatcact
agcttaaattttggtgggaacccgctgcactgcaattgcgagctgctatggttacggagg
ctaatccgcggggacgacatggaaacgtgtgccacacctcctcacctggctggaagatat
ttctggtcgattcctgaggaggagtttacctgtgaaccaccgctgatcactcgtcacact
cacaagctgtgggtgctggagggccagagagccacgctcaaatgccgtgccattggtgac
ccagagccagtaatccactgggtttcccccgacgaccgcatcgttgccaattcatcccgg
accagctccttcagcaatgggaccttggatatcttagtaacagtggcccgcgatgacggg
gcgtacacgtgtattgcaataaacgcagcgggtgaggcaactgccactgtggacctgaaa
ataatccccctgcctcaccgcggcggagcaggtggaaacgcagggaataataacgtgaac
accaaaaacaccgggaacgtgaccaatgggattttacggaccgatccgggctcttctgat
atcagcacgggtataaacggagggattaacaatggagcaggacgaggaggggaggcagag
gacggaaagaaagacgatgagggcgaaagtagcaaggcctctgaaggggagacggccaat
ggagggagcatggaggacgaggaggaggaggaagaaaggagggttggagtacaaggagtt
acgtcaacctcagctcaggtccgatgggatttgggaagtttgtctgcagtttacgcagtc
tggatgtatcagatacagtacaactgcaccgccgacgagaccctcatctacagaatccta
ccatcgaccagtgatcgcttcctgttgaagaacttggtttccggtgcggactataacctg
tgtgttctggccattttcgatgacacaatcacatcactagcggcgacaaaagtcctgggc
tgcgccacgttctccactaaggatgtttacccagcatgccgctctctacatgcccatttc
ctgggcgggacgctcaccatattggttggcggtgtggttgtcgtcaccttgctcgtgttt
accgtcgcgctcatggttcgccaccgcgtttgcaatcatggcgaccacatgatatgtcac
agcgggaacacagaggcggggggaggggcctgctgtcagggtggaggggccggggacaaa
gggggaaacagtggtgggtgctaccaatcgaatggatctggggacgtgatgatggtggtc
ctgcccaatgggctgccgtcaaagagaggaggggagaaggacaaggagaaggacaaggac
aaggagaaggagaaagagaaggaagaggctgatgctgcttcctctctgttgccaaaaccc
cctccaaagcccaggccaaagccgaaagtcaacctggagcagtttctttcagccgggggg
gtagtttccacgacaacaggggcaagtgagatggcattggtggtcaggcaaagaaagctg
gacaaggcgccgccatacacggcggaaagtgacagaactcccctgtactattccccttcc
tccaccctgccccgactgtcccactcgagggaccgcccgaggccccgtctggagcgagaa
ctcaccactcgggccagtttctctctggcggcccccctgggagactcagatctgttggac
tggagaatgagttcccgcagccgggacaaatggaactcctcgcaggcttaccaaagccct
ctgtccccgctaagccccgcctgcgggaccgtcagcaaacggcggcactcgctggacatg
ggctcctctgtcgccctagcaactgctgatgcagccgcgactgttgccaagcgctatgtt
gctggtaattatgccaagcgtctgagcgtgatctggacgcggcggagccagtctctccat
gggatgcttgtgcagtgcggctcaacgacaagcacgacttcctcgacgaccagcgacgag
gagagcggcgtgggctacggagcgcactgcgagttccagagggggtatatccacgcttac
aacaccacaaactccaactctaacactgggatcactgccgggaaagcgatcaaagacatg
gggaggctaacggggaaggacggaaggagtgctgaagaactcgaggaaagtgttgtgtag
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integrated database retrieval system
