Notothenia coriiceps (black rockcod): 104960555
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Entry
104960555 CDS
T04920
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104960555 (slc1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104960555 (slc1a1)
Transporters [BR:
ncc02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
104960555 (slc1a1)
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Motif
Pfam:
SDF
ApeI-like
Motif
Other DBs
NCBI-GeneID:
104960555
NCBI-ProteinID:
XP_010786932
UniProt:
A0A6I9PFD9
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Position
Unknown
AA seq
525 aa
AA seq
DB search
MDMMGNKQRRGVHFKGLLKRNWLLIATIFSVVLGISLGVLVREYASLSHLHKQYFGFPGE
ILMRMLKLVILPLIISSMITGVAALDSEVSGKIGLRAVVYYFSTTIIAVVLGITLVMTIK
PGVSQTADHIDRAGITPNVTTVDTLLDLIRNMFPENLVQACFQQYKTKRKELDPPKVSNN
NTTTIPPLTTAIMSVVENITKEYKIVGSYSDGINVLGLIVFCVAFGLVIGKMGEKGRILL
EFFDALNEATMRLVNIIMCYMPVGILFLIAAKIIEVEDWEIFKKMGLYMVTVLSGLAIHA
TICLPLIFFVIVRKNPYTFTLGMAQALVTALMISSSSATLPVTFRCAEENNRIDKRITRF
VLPVGATINMDGTALYEAVAAIFIAQLNDYHLDVGQIVTISITATVASIGAAGVPNAGLV
TMVIVLTAVGLPANDVTLIVAVDWLLDRFRTMINVLGDAYGAGIVQKLSKNELERMDLIS
DVDVANPFALEATLDDEECEKKSYVNGGFTVDKTDAISFTETSQF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatgggtaacaaacagcgacgaggcgtgcatttcaagggcttgctgaagagg
aactggcttctaatcgccacgattttctccgtggtgctcgggatcagtctgggcgtcctg
gtcagagagtatgcgtccctctcacacctccacaagcagtatttcggcttcccaggagag
atcctcatgcggatgctgaagctggtcatcctcccactcatcatctcaagcatgataaca
ggtgttgcagccctggattctgaggtgtcggggaagataggtctgcgagctgtagtctat
tacttctcaaccaccatcatcgcagtggttcttgggatcactttggtgatgactatcaaa
ccaggagtttctcaaacagctgatcacatcgacagagctggaatcacgcccaacgtcacc
acagtggacaccctcctggacctcatcagaaacatgttccccgaaaatctggtgcaggct
tgttttcagcagtacaagaccaagcgcaaagagttggaccctcccaaggtttccaacaac
aacaccaccaccatcccccccctcacaaccgctatcatgtcggtggtagagaacataacc
aaggaatataagatcgttggctcatattcggatggaatcaacgttttggggctcatcgtg
ttctgtgttgcttttggccttgtcattgggaagatgggggaaaagggtcggatactcctg
gaattctttgacgccctgaatgaagccaccatgaggctggtcaacatcatcatgtgctac
atgccagtagggatcctgttcctaattgctgctaagattatcgaggtggaagactgggag
atcttcaagaagatgggtctttatatggtgacggtgctgagcggtctggctatccacgcc
accatctgtctgccacttatcttcttcgtcattgtgaggaagaacccgtataccttcaca
ttgggaatggcccaggccctggtgacagcactcatgatctcctccagctctgccaccctg
cctgtcaccttccgatgtgctgaggagaacaatcgcatcgacaagcggatcacccgcttc
gtcctccctgtgggggcaaccatcaacatggatgggacggcactgtatgaggcggtggca
gccatcttcatcgcccagctgaatgactaccatctggatgtgggccagattgtcactatc
agtataacagcaacggttgccagtattggagcagcaggagtcccaaacgctgggctggtc
accatggtgatagtcttaacagctgttggattacctgcaaatgatgtcactctgatagtc
gctgtggattggctgctggaccggttccgcactatgatcaacgttcttggcgatgcttat
ggagccggtattgttcagaaactatccaaaaatgaactggagaggatggatctgatatca
gatgtagatgtcgccaacccttttgctctggaagctactttggatgatgaagagtgcgag
aagaagtcctacgtcaatggaggcttcaccgtcgacaagacagatgcaatctccttcact
gaaacctctcagttctag
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