Notothenia coriiceps (black rockcod): 104960715
Help
Entry
104960715 CDS
T04920
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
ncc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104960715 (srrm1)
03015 mRNA surveillance pathway
104960715 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104960715 (srrm1)
03041 Spliceosome [BR:
ncc03041
]
104960715 (srrm1)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104960715 (srrm1)
Spliceosome [BR:
ncc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104960715 (srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
GIP4
Motif
Other DBs
NCBI-GeneID:
104960715
NCBI-ProteinID:
XP_010787170
UniProt:
A0A6I9PHL4
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTETL
GFEDDVVIELIFNLLEEKNPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLATLKKVDDDKKEKDIRDRAQSKSPRSLHRPMSRRKSRSP
SPRRRSPVKRERKRSASRSPRRKPSPVASSSPPPPLMQLPAKPVEQLVEPNALEGALPEP
AIQETPSTCDTVVEVVKPDPVTEVKESSPEKPLKKEERPKSRDREKDSRRDRPHHRSRSH
SRNRRRRSRSRSYSPRRRPSPRRRMSPRRRSPPRRGPPGNRNRHRRSPVRRRRSRSASSS
GSSSSNSRSPKKAMKRISNSPPRKGVHHPEKAISPAGKDRRSPSPRARRGRGSASPARPS
GLKQKQRGRNDSPSDNAKPRPSEGSDSEEDKNDKEATADSVQQRRQYRRQNRQTSSG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacaagtgcggagcaagacaaccgtttcagcaataag
cagaagaaactgctgaagcagctgaagtttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggataactcagcgagtgacagaaactctg
ggattcgaggatgatgtcgtcatagagttaatatttaacctgcttgaggagaagaatcca
gatagcaagatgatgcagatcaacctgacaggctttctgaatgggaagaacgcccgggag
ttcatgagggacctgtggcccctgctgctgagtgctcaggagaacattgctggcatcccc
tctgctttcctggaacagaagaaggaggaaattaaacagagacagattgaacaagagaag
ctagctactctgaagaaagtcgatgatgataagaaggaaaaggacatcagagacagggct
cagtcaaaaagcccaagaagtttgcatcgtccgatgtctaggaggaaatcaaggtcaccg
tcaccacggcgaaggtcgccagtgaagcgtgaaaggaaacggagtgcctctcgctcgccg
agacgcaaacccagtccagtcgccagcagctccccccctccacccctgatgcagctgcca
gccaaacctgtggagcagcttgtggagccgaatgcattagaaggagccctgccagagccg
gccatccaagaaactccttccacatgtgacacagttgtggaggtggtgaaaccagaccca
gttactgaagtcaaagaatcttcgccagagaagcctctcaagaaagaggaaaggcccaag
tcccgggacagggagaaggacagcaggagggacagacctcaccaccgctctcgttctcat
tcccgcaaccgcaggcgacgctcccgctctagatcctactctcctcgtagaagaccaagt
cccaggaggaggatgtctcctcgtcgtaggagcccccccaggcgtggcccccctggcaac
agaaacagacatagacggtccccagtccgcaggaggcgctcacgctctgcttcatcttct
ggcagcagctcctccaactctcgctctcctaaaaaagcaatgaagagaatatccaactcc
ccacccagaaagggggtccatcatcctgaaaaagccatcagccccgccgggaaggacagg
cggtcaccatctcctcgggccagaagaggccgaggctctgcgtcaccagccaggccgtct
gggttaaagcaaaaacaaaggggaaggaatgattctccgtctgataatgccaagcccaga
ccttctgaaggctctgactcagaggaggataaaaatgacaaagaggcaacagcagattcg
gtgcagcagcgacgtcagtatcgcaggcagaaccgacagacatcttcaggttaa
DBGET
integrated database retrieval system
